RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SDHAF3Q9NRP4 125 aa11.73□□□□□ -0.53
TNFRSF1A-207ENST00000535958 XPR1Q9UBH6 696 aa11.73□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
TNFRSF1A-207ENST00000535958 GPR55Q9Y2T6 319 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MRPS18CQ9Y3D5 142 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-207ENST00000535958 GNG14A0A1W2PPG7 69 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TRIM64A6NGJ6 449 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TRIM64BA6NI03 449 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PDYNP01213 254 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 INHBAP08476 426 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FCGR2AP12318 317 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PCYT1AP49585 367 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CLK3P49761 638 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EMDP50402 254 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PNLIPRP2P54317 469 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 GANABQ14697 944 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SGCBQ16585 318 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SH2D4BQ5SQS7 431 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PLEKHM3Q6ZWE6 761 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ZNF550Q7Z398 422 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CCDC116Q8IYX3 515 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ZNF675Q8TD23 568 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EXOSC8Q96B26 276 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EFHD2Q96C19 240 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TM4SF18Q96CE8 201 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CNRIP1Q96F85 164 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 NSUN5Q96P11 429 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PINK1Q9BXM7 581 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KLHL4Q9C0H6 718 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KCNF1Q9H3M0 494 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CXorf56Q9H5V9 222 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TAS2R9Q9NYW1 312 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ARID1AO14497 2285 aa11.72□□□□□ -0.53
TNFRSF1A-207ENST00000535958 JMJD1CQ15652 2540 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 HIVEP2P31629 2446 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 H3BML4 177 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 LINC01387J3KSC0 135 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EMC8O43402 210 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 COQ9O75208 318 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PLGP00747 810 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KRT6AP02538 564 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KRT6BP04259 564 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EVI2BP34910 448 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KRT6CP48668 564 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CORO7P57737 925 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 DUSP2Q05923 314 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 GALNT1Q10472 559 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 STX5Q13190 355 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 HEPACAMQ14CZ8 416 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EXOC3L2Q2M3D2 409 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ZNF628Q5EBL2 1059 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 BTLAQ7Z6A9 289 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 SLC44A2Q8IWA5 706 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FAM9CQ8IZT9 166 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 OR9A2Q8NGT5 310 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FIG4Q92562 907 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 KAT2AQ92830 837 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 CAVIN3Q969G5 261 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 HBEGFQ99075 208 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 PIGQQ9BRB3 760 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 DSN1Q9H410 356 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FOLH1BQ9HBA9 442 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ZBTB26Q9HCK0 441 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FARSBQ9NSD9 589 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 STOML1Q9UBI4 398 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 VPS29Q9UBQ0 182 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 TRPS1Q9UHF7 1281 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MCM8Q9UJA3 840 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 MRTO4Q9UKD2 239 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 EMC9Q9Y3B6 208 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 ZNF175Q9Y473 711 aa11.71□□□□□ -0.53
TNFRSF1A-207ENST00000535958 FN1P02751 2386 aaKnown RBP11.71□□□□□ -0.54
TNFRSF1A-207ENST00000535958 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SIAH2O43255 324 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PCDH7O60245 1069 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TSPAN2O60636 221 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CNOT4O95628 575 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 IL3P08700 152 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 RPS17P08708 135 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CD8BP10966 210 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HSD3B1P14060 373 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HSD3B2P26439 372 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HMOX2P30519 316 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MPIP34949 423 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PTH2RP49190 550 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PON3Q15166 354 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNHIT3Q15649 155 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 BEX5Q5H9J7 111 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF474Q6S9Z5 364 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PRIMA1Q86XR5 153 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PLD6Q8N2A8 252 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 VSTM2LQ96N03 204 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GPR78Q96P69 363 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms