RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MKRN2OSH3BPM6 223 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SLC1A7O00341 560 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SLC7A4O43246 635 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 COCHO43405 550 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SPRY1O43609 319 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SOCS5O75159 536 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TRMUO75648 421 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 GSRP00390 522 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TNNC2P02585 160 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 P4HA1P13674 534 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 WARSP23381 471 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 MPZP25189 248 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TNNT3P45378 269 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 LEPRP48357 1165 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 DNA2P51530 1060 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SLC8A3P57103 927 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 RPS14P62263 151 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TFAMQ00059 246 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SPAG1Q07617 926 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF177Q13360 481 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 IGFBP7Q16270 282 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 KBTBD12Q3ZCT8 623 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ANKRD20A4Q4UJ75 823 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 LACTB2Q53H82 288 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ANKRD20A8PQ5CZ79 823 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ANKRD20A2Q5SQ80 823 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 MPP7Q5T2T1 576 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ANKRD20A1Q5TYW2 823 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 LRRC38Q5VT99 294 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SDHAF4Q5VUM1 108 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ANKRD20A3Q5VUR7 823 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 BSPRYQ5W0U4 402 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 UGT3A1Q6NUS8 523 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 CAVIN1Q6NZI2 390 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TTC27Q6P3X3 843 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 LINC00696Q6ZRV3 163 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 C1orf186Q6ZWK4 172 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 RUFY3Q7L099 469 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 HOOK3Q86VS8 718 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ANKRD46Q86W74 232 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 HPS6Q86YV9 775 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SIAH3Q8IW03 269 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 APLFQ8IW19 511 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TUSC5Q8IXB3 177 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ARHGAP18Q8N392 663 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 PDCL2Q8N4E4 241 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 C10orf53Q8N6V4 93 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 BMPERQ8N8U9 685 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 OR4C15Q8NGM1 316 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 NR4A3Q92570 626 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 KIAA1143Q96AT1 154 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TMA16Q96EY4 203 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 EEF2KMTQ96G04 330 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 BSCL2Q96G97 398 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 C4orf45Q96LM5 186 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TSSK2Q96PF2 358 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 PCNX1Q96RV3 2341 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 SYT15Q9BQS2 421 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 MED10Q9BTT4 135 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 TDRD1Q9BXT4 1180 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 VIPAS39Q9H9C1 493 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 DDX19AQ9NUU7 478 aaKnown RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 IL37Q9NZH6 218 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 RNF150Q9ULK6 438 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 A0A087WWV3 80 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 FAM92AA1XBS5 289 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 MEIOCA2RUB1 952 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 C5orf52A6NGY3 159 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 IFITM10A6NMD0 228 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 EFCAB7A8K855 629 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 A8MXQ7 604 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 F8VVB4 439 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 F8VWA3 439 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 INPP4BO15327 924 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ARHGEF9O43307 516 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 LATO43561 262 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 KLHL41O60662 606 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 JAK2O60674 1132 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 REC8O95072 547 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 RAF1P04049 648 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 IGHV4-34P06331 123 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 GSTA2P09210 222 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 FAM58BPP0C7Q3 252 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 FRMD6-AS1P0C7T7 363 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ZDHHC11BP0C7U3 371 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF18P17022 549 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 RPL35AP18077 110 aaKnown RBP2.88□□□□□ -1.95
SNHG1-202ENST00000535689 NR1D1P20393 614 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 AKT2P31751 481 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 UGT1A5P35504 534 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ACOT2P49753 483 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 CLDN15P56746 228 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 CLDN17P56750 224 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 TNNC1P63316 161 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 GTF2BQ00403 316 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF415Q09FC8 603 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 PEX6Q13608 980 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 CST6Q15828 149 aa2.88□□□□□ -1.95
SNHG1-202ENST00000535689 CLPPQ16740 277 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms