RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZNF23P17027 643 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 EPORP19235 508 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 IL2RGP31785 369 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 BUD31P41223 144 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 CASP2P42575 452 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 EIF1AXP47813 144 aaKnown RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 HNMTP50135 292 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 CDKL1Q00532 357 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 IQCCQ4KMZ1 466 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 KHDRBS2Q5VWX1 349 aaKnown RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 ANKRD22Q5VYY1 191 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 ARMC3Q5W041 872 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 MRM1Q6IN84 353 aaKnown RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 B3GLCTQ6Y288 498 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 PEX26Q7Z412 305 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 GGNQ86UU5 652 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 LMNTD2Q8IXW0 634 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 FBXL14Q8N1E6 418 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 FADS6Q8N9I5 356 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 OR7G1Q8NGA0 311 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 TMBIM1Q969X1 311 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 ESAMQ96AP7 390 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 TMCO6Q96DC7 493 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 WDR34Q96EX3 536 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 PTCD3Q96EY7 689 aaKnown RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 PDLIM5Q96HC4 596 aaKnown RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 COL21A1Q96P44 957 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 BTBD9Q96Q07 612 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 ADOQ96SZ5 270 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 PIMREGQ9BSJ6 248 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 FAM167BQ9BTA0 163 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 CAPS2Q9BXY5 557 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 POTEKPQ9BYX7 375 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 GPRC5BQ9NZH0 403 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 MED11Q9P086 117 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 SLC17A6Q9P2U8 582 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 EGFL7Q9UHF1 273 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 EPN1Q9Y6I3 576 aaPredicted RBP7.33□□□□□ -1.24
CLIP1-206ENST00000535290 EXPH5Q8NEV8 1989 aa7.33□□□□□ -1.24
CLIP1-206ENST00000535290 NCF1BA6NI72 391 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 OR6C70A6NIJ9 312 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 NCF1CA8MVU1 366 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 SHISA8B8ZZ34 492 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 TRIM77I1YAP6 450 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 NDUFS8O00217 210 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 PLPP1O14494 284 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 EIF1AYO14602 144 aaKnown RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 ACOX3O15254 700 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 TAPBPO15533 448 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 REM1O75628 298 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 ALX3O95076 343 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 ADAP00813 363 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 TPM1P09493 284 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 CCDC175P0C221 793 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 NCF1P14598 390 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 NT5EP21589 574 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 AGTR1P30556 359 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 HILS1P60008 231 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 SPOCK1Q08629 439 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 MGAT2Q10469 447 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 KIF5AQ12840 1032 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 EXOSC7Q15024 291 aaKnown RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 SPA17Q15506 151 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 CARTPTQ16568 116 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 FAM111BQ6SJ93 734 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 TFAP2EQ6VUC0 442 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 Q6ZSR9 355 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 NUFIP2Q7Z417 695 aaKnown RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 EXOC3L1Q86VI1 746 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 VSTM4Q8IW00 320 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 ZCCHC7Q8N3Z6 543 aaKnown RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 ADCY4Q8NFM4 1077 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 OR2M3Q8NG83 312 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 OR52B6Q8NGF0 335 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 OR10D3Q8NH80 312 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 RNF138Q8WVD3 245 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 KCTD4Q8WVF5 259 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 KISS1RQ969F8 398 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 MRRFQ96E11 262 aaKnown RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 DTNBP1Q96EV8 351 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 TMEM79Q9BSE2 394 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 EFCAB11Q9BUY7 163 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 RBM4Q9BWF3 364 aaKnown RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 ZNF717Q9BY31 904 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 BPESC1Q9GZL8 116 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 VWA7Q9Y334 891 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 OARD1Q9Y530 152 aa7.32□□□□□ -1.24
CLIP1-206ENST00000535290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLIP1-206ENST00000535290 A0A0A6YYD5 115 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 MIF4GDA9UHW6 222 aaKnown RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 GOLGA8MH3BSY2 632 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 LINC01387J3KSC0 135 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 TO15178 435 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 CXCL13O43927 109 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 NME6O75414 186 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-206ENST00000535290 OPN1LWP04000 364 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 TPM3P06753 285 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 TUBBP07437 444 aa7.31□□□□□ -1.24
CLIP1-206ENST00000535290 PCNAP12004 261 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms