RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CYP4B1P13584 511 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 IL12BP29460 328 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 MAP3K8P41279 467 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 TMED10P49755 219 aaKnown RBP12.86□□□□□ -0.35
VPS11-205ENST00000534551 STX1BP61266 288 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 KCNJ2P63252 427 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 PRR5P85299 388 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 ALDH6A1Q02252 535 aaKnown RBP12.86□□□□□ -0.35
VPS11-205ENST00000534551 FOXO1Q12778 655 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 DPY19L1Q2PZI1 675 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 SLC22A10Q63ZE4 541 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 FIGNL1Q6PIW4 674 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 GK5Q6ZS86 529 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 FUNDC1Q8IVP5 155 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 FAM98AQ8NCA5 519 aaKnown RBP12.86□□□□□ -0.35
VPS11-205ENST00000534551 GPR151Q8TDV0 419 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 CHMP6Q96FZ7 201 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 SGCZQ96LD1 299 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 JSRP1Q96MG2 331 aaPredicted RBP12.86□□□□□ -0.35
VPS11-205ENST00000534551 RILPQ96NA2 401 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 CCDC115Q96NT0 180 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 COL21A1Q96P44 957 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 DOHHQ9BU89 302 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 TTTY12Q9BZ98 90 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 C3orf14Q9HBI5 128 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 SERHLQ9NQF3 203 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 FBXO34Q9NWN3 711 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 CCDC167Q9P0B6 97 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 NPIPA1Q9UND3 350 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 MAPRE3Q9UPY8 281 aa12.86□□□□□ -0.35
VPS11-205ENST00000534551 GCN1Q92616 2671 aaKnown RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 NPIPA5A0A0B4J1W7 369 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 PRSS51A0A1B0GVH4 220 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 PRAMEF25A6NGN4 478 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 B4DXG7 233 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 NPIPA7E9PJI5 369 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 CDK2AP1O14519 115 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 ADAM10O14672 748 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 TFECO14948 347 aaPredicted RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 SCO2O43819 266 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 NKX2-2O95096 273 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 RFPL3SP0C7P2 107 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 NPIPA8P0DM63 369 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 TROVE2P10155 538 aaKnown RBP eCLIP12.85□□□□□ -0.35
VPS11-205ENST00000534551 CAPN3P20807 821 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 CNR1P21554 472 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 RNF144AP50876 292 aaPredicted RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 POLR2JP52435 117 aaKnown RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 MRPS22P82650 360 aaKnown RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 PLGLB1Q02325 96 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 SQLEQ14534 574 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 SLC2A7Q6PXP3 512 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 CDRT4Q8N9R6 151 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 ZFP62Q8NB50 900 aaPredicted RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 OR56A1Q8NGH5 318 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 OR52N2Q8NGI0 321 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 PNPT1Q8TCS8 783 aaKnown RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 SLC35A4Q96G79 324 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 SLC35G5Q96KT7 338 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 OR7D2Q96RA2 312 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 FAM173AQ9BQD7 235 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 SLC35A5Q9BS91 424 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 RTN4RQ9BZR6 473 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 METTL7AQ9H8H3 244 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 Q9N2J8 555 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 AGPAT4Q9NRZ5 378 aa12.85□□□□□ -0.35
VPS11-205ENST00000534551 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.85□□□□□ -0.35
VPS11-205ENST00000534551 RP1L1Q8IWN7 2480 aaPredicted RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 UBR5O95071 2799 aaPredicted RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 FAM234BA2RU67 622 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 CAPN14A8MX76 684 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 KLRC4-KLRK1H3BQV0 150 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 GNB5O14775 395 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 UNC5CO95185 931 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 ALOX5P09917 674 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 NCF2P19878 526 aaPredicted RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 KRT20P35900 424 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 CASP3P42574 277 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 MAGEA5P43359 124 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 PRIM2P49643 509 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 SEC24CP53992 1094 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 RCAN2Q14206 197 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 AGKQ53H12 422 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 ANXA8L1Q5VT79 327 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 FNDC7Q5VTL7 733 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 TNFAIP8L2Q6P589 184 aaPredicted RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 SPPL2CQ8IUH8 684 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 DND1Q8IYX4 353 aaKnown RBP12.84□□□□□ -0.35
VPS11-205ENST00000534551 TMEM251Q8N6I4 163 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 NATD1Q8N6N6 113 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 COX18Q8N8Q8 333 aa12.84□□□□□ -0.35
VPS11-205ENST00000534551 GLB1L3Q8NCI6 653 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms