RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 OXSMQ9NWU1 459 aa8.1□□□□□ -1.11
COPB1-211ENST00000534234 FBXL2Q9UKC9 423 aa8.1□□□□□ -1.11
COPB1-211ENST00000534234 C19orf53Q9UNZ5 99 aaPredicted RBP8.1□□□□□ -1.11
COPB1-211ENST00000534234 MRPS18CQ9Y3D5 142 aaKnown RBP8.1□□□□□ -1.11
COPB1-211ENST00000534234 POLR3HQ9Y535 204 aaPredicted RBP8.1□□□□□ -1.11
COPB1-211ENST00000534234 WIF1Q9Y5W5 379 aa8.1□□□□□ -1.11
COPB1-211ENST00000534234 CACNA1CQ13936 2221 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 TEP1Q99973 2627 aaKnown RBP8.09□□□□□ -1.11
COPB1-211ENST00000534234 A0A087WV62 115 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 FAM221AA4D161 298 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 TUBAL3A6NHL2 446 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 SMIM23A6NLE4 172 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 EEF1E1-BLOC1S5C9J1V9 151 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 H0Y3Z8 333 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 UPK1AO00322 258 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 COPEO14579 308 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 EEF1E1O43324 174 aaKnown RBP8.09□□□□□ -1.11
COPB1-211ENST00000534234 ZIC3O60481 467 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 COQ9O75208 318 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 SEC22BO75396 215 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 RSL1D1O76021 490 aaKnown RBP8.09□□□□□ -1.11
COPB1-211ENST00000534234 SLITRK5O94991 958 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 IL18BPO95998 194 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 TMIGD3P0DMS9 266 aaPredicted RBP8.09□□□□□ -1.11
COPB1-211ENST00000534234 UROSP10746 265 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 CD1EP15812 388 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 GRK2P25098 689 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 DPP4P27487 766 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 MC3RP41968 323 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 IST1P53990 364 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 GAS1P54826 345 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 ZNF155Q12901 538 aaPredicted RBP8.09□□□□□ -1.11
COPB1-211ENST00000534234 FOXF2Q12947 444 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 GAB1Q13480 694 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 CYP27C1Q4G0S4 372 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 FLYWCH1Q4VC44 716 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 NOXRED1Q6NXP6 359 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 TMEM107Q6UX40 140 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 ADGRE4PQ86SQ3 457 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 TDRPQ86YL5 185 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 LRRN4CLQ8ND94 238 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 GOT1L1Q8NHS2 421 aaPredicted RBP8.09□□□□□ -1.11
COPB1-211ENST00000534234 DTNBP1Q96EV8 351 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 EGLN2Q96KS0 407 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 SFXN2Q96NB2 322 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 AMDHD1Q96NU7 426 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 TM9SF2Q99805 663 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 LIME1Q9H400 295 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 GLIPR2Q9H4G4 154 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 PPCSQ9HAB8 311 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 TNFRSF12AQ9NP84 129 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 DKKL1Q9UK85 242 aa8.09□□□□□ -1.11
COPB1-211ENST00000534234 RPH3AQ9Y2J0 694 aaPredicted RBP8.09□□□□□ -1.11
COPB1-211ENST00000534234 DNAJC13O75165 2243 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 A6NNC1 897 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 CLCA1A8K7I4 914 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 PLOD2O00469 737 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 FADS1O60427 444 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 RCBTB2O95199 551 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 EPXP11678 715 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 KRT4P19013 534 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 TCEA1P23193 301 aaKnown RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 CHMP24386 653 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 TACR1P25103 407 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 NTSP30990 170 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 LHX2P50458 406 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 DSCR4P56555 118 aaPredicted RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 DAZAP2Q15038 168 aaPredicted RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 KIAA0040Q15053 153 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 ZNHIT3Q15649 155 aaPredicted RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 DECR1Q16698 335 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 CLEC6AQ6EIG7 209 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 PLXDC2Q6UX71 529 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 OR2L13Q8N349 312 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 OR4K17Q8NGC6 315 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 LINC01560Q8TB33 94 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 RNF138Q8WVD3 245 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 WNT2BQ93097 391 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 INTS12Q96CB8 462 aaKnown RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 ELP4Q96EB1 424 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 METTL2AQ96IZ6 378 aaKnown RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 ZFP3Q96NJ6 502 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 UCN2Q96RP3 112 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 G6PC3Q9BUM1 346 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 DSN1Q9H410 356 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 SDHAF3Q9NRP4 125 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 CCM2LQ9NUG4 571 aaPredicted RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 DDX18Q9NVP1 670 aaKnown RBP8.08□□□□□ -1.12
COPB1-211ENST00000534234 JKAMPQ9P055 326 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 PPP4R1LQ9P1A2 415 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 CBLCQ9ULV8 474 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 BOLA1Q9Y3E2 137 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 CCL27Q9Y4X3 112 aa8.08□□□□□ -1.12
COPB1-211ENST00000534234 C17orf51A8MQB3 221 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 B4DXG7 233 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 SLC28A1O00337 649 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 RGS14O43566 566 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 SCO2O43819 266 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 ZNF708P17019 499 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 EVI2BP34910 448 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms