RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	FCMR	O60667	390 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	EML2	O95834	649 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	PAH	P00439	452 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	AMBP	P02760	352 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	CPN1	P15169	458 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	CD9	P21926	228 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	CSTF2	P33240	577 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	AHR	P35869	848 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	MAP2K2	P36507	400 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	CHRNA7	P36544	502 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	NPY2R	P49146	381 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	CCR4	P51679	360 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	LIMK2	P53671	638 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	MLLT10	P55197	1068 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	HAND2	P61296	217 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	MFGE8	Q08431	387 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	PJVK	Q0ZLH3	352 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	BST1	Q10588	318 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	GTF2H2	Q13888	395 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	P2RY14	Q15391	338 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	OR1C1	Q15619	314 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	SSX2	Q16385	188 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	HKDC1	Q2TB90	917 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	SLC35D3	Q5M8T2	416 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	RTL6	Q6ICC9	239 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	OR7E24	Q6IFN5	339 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	FBXL22	Q6P050	247 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	GTF2H2C	Q6P1K8	395 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	SLC27A4	Q6P1M0	643 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	DHRS11	Q6UWP2	260 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979		Q6ZPB1	254 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	C17orf107	Q6ZR85	190 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	ASB18	Q6ZVZ8	466 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	C5orf24	Q7Z6I8	188 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	KBTBD3	Q8NAB2	608 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	C17orf47	Q8NEP4	570 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	OR4C15	Q8NGM1	316 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	OR52N5	Q8NH56	324 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	SUN5	Q8TC36	379 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	STARD8	Q92502	1023 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	RAPGEF5	Q92565	580 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	PIK3R3	Q92569	461 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	COQ2	Q96H96	371 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	NUP58	Q9BVL2	599 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	CSTL1	Q9H114	145 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	MTIF3	Q9H2K0	278 aa	Known RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	PNN	Q9H307	717 aa	Known RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	EHD1	Q9H4M9	534 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF665	Q9H7R5	613 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	RNF186	Q9NXI6	227 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	PLEK2	Q9NYT0	353 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	SPATA7	Q9P0W8	599 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	THEG	Q9P2T0	379 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	IL36A	Q9UHA7	158 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	OR1A2	Q9Y585	309 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	COLEC10	Q9Y6Z7	277 aa		4.1	□□□□□ -1.75
ATM-223	ENST00000533979	POLR3A	O14802	1390 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	BRD4	O60885	1362 aa	Predicted RBP	4.1	□□□□□ -1.75
ATM-223	ENST00000533979	LOC105371242	A0A075B767	164 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	TRAV26-1	A0A087WT03	109 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	TRBV5-5	A0A0J9YX44	114 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	YJEFN3	A6XGL0	299 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	SRRM4	A7MD48	611 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979		F8VZ95	297 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CLDN5	O00501	218 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	MLNR	O43193	412 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ZSCAN12	O43309	604 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	OR1F1	O43749	312 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	LCMT2	O60294	686 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	JAK2	O60674	1132 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	WBP4	O75554	376 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	HPR	P00739	348 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	TPM1	P09493	284 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ANXA4	P09525	319 aa	Predicted RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	RHOXF2B	P0C7M4	288 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	PABPC4L	P0CB38	370 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CFC1B	P0CG36	223 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CFC1	P0CG37	223 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	PNMT	P11086	282 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF23	P17027	643 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ACKR3	P25106	362 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	HMGB2	P26583	209 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	RDX	P35241	583 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	RFC2	P35250	354 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ACADSB	P45954	432 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	FNTA	P49354	379 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	EIF3E	P60228	445 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	PPIA	P62937	165 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CSTF1	Q05048	431 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	TGM3	Q08188	693 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	NCBP1	Q09161	790 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CCDC173	Q0VFZ6	552 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ITGA9	Q13797	1035 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	EXOSC2	Q13868	293 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	SQLE	Q14534	574 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ELAVL3	Q14576	367 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CAMK4	Q16566	473 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms