RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 RAB5CP51148 216 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CLCN7P51798 805 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PRPS1P60891 318 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RASGEF1BQ0VAM2 473 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CDONQ4KMG0 1287 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ZNF789Q5FWF6 425 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HLA-DQA1Q5Y7H0 255 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 C22orf42Q6IC83 251 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FAM111BQ6SJ93 734 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ZNF704Q6ZNC4 412 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 PAQR9Q6ZVX9 377 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 JAZF1Q86VZ6 243 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 NPAS4Q8IUM7 802 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 MSRB3Q8IXL7 192 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 BEST3Q8N1M1 668 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FAM98AQ8NCA5 519 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR10H5Q8NGA6 315 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR2T27Q8NH04 317 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 NFKBIDQ8NI38 313 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RNF141Q8WVD5 230 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ST8SIA4Q92187 359 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SLC6A17Q9H1V8 727 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CCDC86Q9H6F5 360 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 EVLQ9UI08 416 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 MAP4K5Q9Y4K4 846 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PCDHGA6Q9Y5G7 932 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ENTPD2Q9Y5L3 495 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ADAM10O14672 748 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 EEF1E1O43324 174 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR2T1O43869 369 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RENP00797 406 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GBAP04062 536 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HTR1AP08908 422 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PIRTP0C851 137 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ATP5A1P25705 553 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 AOAHP28039 575 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SLC6A1P30531 599 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FOXA1P55317 472 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CTBSQ01459 385 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SOX4Q06945 474 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 PDE7AQ13946 482 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GRB14Q14449 540 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GRIN2CQ14957 1233 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PAN3Q58A45 887 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 SHFQ7M4L6 423 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PIM3Q86V86 326 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 IQCHQ86VS3 1027 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SLC35F3Q8IY50 421 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 TCEAL8Q8IYN2 117 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FAM86B1Q8N7N1 296 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR6M1Q8NGM8 313 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 OR56A3Q8NH54 315 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 COQ8AQ8NI60 647 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SUSD6Q92537 303 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PRAP1Q96NZ9 151 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SORCS2Q96PQ0 1159 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PKP4Q99569 1192 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CST11Q9H112 138 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CCSER2Q9H7U1 834 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 BCO1Q9HAY6 547 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 Q9N2J8 555 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 MRPL17Q9NRX2 175 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 TAS2R5Q9NYW4 299 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 MGAT4CQ9UBM8 478 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PRODH2Q9UF12 536 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 YIPF1Q9Y548 306 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 IGLON5A6NGN9 336 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SLC38A8A6NNN8 435 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 NCR1O76036 304 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 IFNA17P01571 189 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RPS19P39019 145 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 GLP1RP43220 463 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RAB28P51157 221 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 AIMP2Q13155 320 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 CTU2Q2VPK5 515 aaKnown RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 NXPE4Q6UWF7 544 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 GSG1LQ6UXU4 331 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 COMMD6Q7Z4G1 85 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CEACAM19Q7Z692 300 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PTOV1Q86YD1 416 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 CDH26Q8IXH8 852 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ESAMQ96AP7 390 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ARHGAP9Q9BRR9 750 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SMCO4Q9NRQ5 59 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HECAQ9UBI9 543 aaPredicted RBP3.83□□□□□ -1.8
SOX6-217ENST00000533870 TRABD2BA6NFA1 517 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 HTR3BO95264 441 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 NFATC1O95644 943 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 APBB3O95704 486 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 ADRB1P08588 477 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 AKAIN1P0CW23 69 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 IFI30P13284 250 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 SPI1P17947 270 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 IGFALSP35858 605 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 AHRP35869 848 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 PIGAP37287 484 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 RFX2P48378 723 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 UGT8Q16880 541 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 FUT10Q6P4F1 479 aa3.83□□□□□ -1.8
SOX6-217ENST00000533870 IL34Q6ZMJ4 242 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms