RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CCDC168Q8NDH2 2452 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 MED12Q93074 2177 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 SYT5O00445 386 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 PLOD2O00469 737 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 SRD5A2P31213 254 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 KIR2DL3P43628 341 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 ASCL1P50553 236 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 PSG6Q00889 435 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 SRYQ05066 204 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 IFFO1Q0D2I5 559 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 ZNHIT3Q15649 155 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-211ENST00000533492 OR5M10Q6IEU7 315 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 AAGABQ6PD74 315 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 IFNEQ86WN2 208 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 HOMEZQ8IX15 550 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 RELL2Q8NC24 303 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-211ENST00000533492 OR4K17Q8NGC6 315 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 ZPLD1Q8TCW7 415 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 AMDHD1Q96NU7 426 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 TRMOQ9BU70 441 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 GATA5Q9BWX5 397 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-211ENST00000533492 LRTM1Q9HBL6 345 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 DKKL1Q9UK85 242 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 MRTO4Q9UKD2 239 aaKnown RBP14.05□□□□□ -0.16
CPSF1-211ENST00000533492 L3MBTL1Q9Y468 752 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 OTOGQ6ZRI0 2925 aa14.05□□□□□ -0.16
CPSF1-211ENST00000533492 H0Y3Z8 333 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 UPK1AO00322 258 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 NEFHP12036 1026 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 CPN1P15169 458 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 PRPH2P23942 346 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 GRK2P25098 689 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 CTSSP25774 331 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 GPC1P35052 558 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 OPRM1P35372 400 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 ZNF136P52737 540 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 DGKQP52824 942 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 SNTB1Q13884 538 aaKnown RBP14.04□□□□□ -0.16
CPSF1-211ENST00000533492 KIAA0040Q15053 153 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 DECR1Q16698 335 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 CYP27C1Q4G0S4 372 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 ZZZ3Q8IYH5 903 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 RIBC1Q8N443 379 aaPredicted RBP14.04□□□□□ -0.16
CPSF1-211ENST00000533492 OR2W6PQ8NHA6 318 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 RNASE6Q93091 150 aaKnown RBP14.04□□□□□ -0.16
CPSF1-211ENST00000533492 GFM2Q969S9 779 aaKnown RBP14.04□□□□□ -0.16
CPSF1-211ENST00000533492 ELP4Q96EB1 424 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 APOPT1Q96IL0 206 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 EGLN2Q96KS0 407 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 SFXN2Q96NB2 322 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 Q9N2J8 555 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 SDHAF3Q9NRP4 125 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 PPP4R1LQ9P1A2 415 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 FOXD3Q9UJU5 478 aaPredicted RBP14.04□□□□□ -0.16
CPSF1-211ENST00000533492 FBXL2Q9UKC9 423 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 CBLCQ9ULV8 474 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 MRPS18CQ9Y3D5 142 aaKnown RBP14.04□□□□□ -0.16
CPSF1-211ENST00000533492 CCL27Q9Y4X3 112 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 PTGDR2Q9Y5Y4 395 aa14.04□□□□□ -0.16
CPSF1-211ENST00000533492 ANKRD17O75179 2603 aaKnown RBP14.04□□□□□ -0.16
CPSF1-211ENST00000533492 CSMD2Q7Z408 3487 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 MBD3L4A6NDZ8 208 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 MBD3L3A6NE82 208 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 MBD3L5A6NJ08 208 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 SCO2O43819 266 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 LINC00032P0C843 101 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 TACR1P25103 407 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 DPP4P27487 766 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 EVI2BP34910 448 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 STARP49675 285 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 CLK3P49761 638 aaKnown RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 AGFG1P52594 562 aaKnown RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 PSMD4P55036 377 aaKnown RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 GAB1Q13480 694 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 PCLAFQ15004 111 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 Q6ZSR9 355 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 OR2L13Q8N349 312 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 MBD3L2Q8NHZ7 208 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 TUBA1CQ9BQE3 449 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 ANKZF1Q9H8Y5 726 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 C3orf14Q9HBI5 128 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 EML4Q9HC35 981 aaKnown RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 SH3BP4Q9P0V3 963 aa14.03□□□□□ -0.16
CPSF1-211ENST00000533492 RPH3AQ9Y2J0 694 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-211ENST00000533492 EEF1E1-BLOC1S5C9J1V9 151 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 NPIPB8E9PQR5 432 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 PDPK1O15530 556 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 EEF1E1O43324 174 aaKnown RBP14.02□□□□□ -0.17
CPSF1-211ENST00000533492 AKAP10O43572 662 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 TMIGD3P0DMS9 266 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-211ENST00000533492 TCEA1P23193 301 aaKnown RBP14.02□□□□□ -0.17
CPSF1-211ENST00000533492 ALDH3A1P30838 453 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 RFX3P48380 749 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 GFRA1P56159 465 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 DSCR4P56555 118 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-211ENST00000533492 HSPB3Q12988 150 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 FBXL19-AS1Q494R0 122 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 GALNTL6Q49A17 601 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 CHMP1BQ7LBR1 199 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 ZNF551Q7Z340 670 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms