RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ZFR2Q9UPR6 939 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RPH3AQ9Y2J0 694 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM186AA6NE01 2351 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 A0A0A6YYJ9 748 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 HHLA1C9JL84 531 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TLX2O43763 284 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 KERAO60938 352 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 CRTAPO75718 401 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 KLF8O95600 359 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 IFNA17P01571 189 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 HOXB2P14652 356 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 RHOQP17081 205 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ETV5P41161 510 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ANXA11P50995 505 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 CTBP2P56545 445 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF91Q05481 1191 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 HYAL2Q12891 473 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 MRPL58Q14197 206 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 PUM1Q14671 1186 aaKnown RBP eCLIP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF542PQ5EBM4 170 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SFRP4Q6FHJ7 346 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TRIM40Q6P9F5 258 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 KDELC1Q6UW63 502 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM151BQ6UXP7 276 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TRILQ7L0X0 811 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 VTCN1Q7Z7D3 282 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 PIM3Q86V86 326 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GLCCI1Q86VQ1 547 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 NLRP8Q86W28 1048 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 FOXRED2Q8IWF2 684 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 OR52N1Q8NH53 320 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 OR56B4Q8NH76 319 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ELP5Q8TE02 316 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ADAMTS14Q8WXS8 1223 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 APOLD1Q96LR9 279 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF599Q96NL3 588 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 CDK15Q96Q40 435 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 HHIPQ96QV1 700 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM126AQ9BYI3 521 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF350Q9GZX5 532 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 OR10A4Q9H209 315 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 CDCP1Q9H5V8 836 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC2A6Q9UGQ3 507 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SCML1Q9UN30 329 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM170BA6NMN3 283 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ARNTLO00327 626 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 NRG2O14511 850 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 KHNYNO15037 678 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GPX5O75715 221 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TCRBP04435 133 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 CLUP10909 449 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ENGP17813 658 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 G0S2P27469 103 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 PCP4P48539 62 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 PITPNBP48739 271 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 HMGCS1Q01581 520 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 RIN1Q13671 783 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 EIF2S3LQ2VIR3 472 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 PKDCCQ504Y2 493 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 EIF5AL1Q6IS14 154 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ALKBH2Q6NS38 261 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TSSK4Q6SA08 328 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GLT6D1Q7Z4J2 308 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GPR149Q86SP6 731 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 NAA40Q86UY6 237 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 LIX1LQ8IVB5 337 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GTPBP8Q8N3Z3 284 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC5A8Q8N695 610 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM86B1Q8N7N1 296 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 FRMD1Q8N878 549 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 VN1R2Q8NFZ6 395 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 OR4Q3Q8NH05 313 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 BTN2A2Q8WVV5 523 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 RFKQ969G6 155 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 MYO19Q96H55 970 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 HRASLS5Q96KN8 279 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF583Q96ND8 569 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TMEM43Q9BTV4 400 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SAP130Q9H0E3 1048 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SLITRK2Q9H156 845 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GHITMQ9H3K2 345 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TCF7L1Q9HCS4 588 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 PRDM9Q9NQV7 894 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TMEM45AQ9NWC5 275 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TAS2R16Q9NYV7 291 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 KCNIP3Q9Y2W7 256 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 PARP14Q460N5 1801 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ARGFXA6NJG6 315 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 CACNG3O60359 315 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ECI2O75521 394 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GATBO75879 557 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 VNN2O95498 520 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SCG5P05408 212 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SNRPD1P62314 119 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ATXN7L3Q14CW9 347 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TAF1AQ15573 450 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 C9orf152Q5JTZ5 239 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC6A19Q695T7 634 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 VITQ6UXI7 678 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 JAZF1Q86VZ6 243 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms