RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CNEP1R1Q8N9A8 125 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF565Q8N9K5 539 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 OR51A7Q8NH64 312 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 THAP4Q8WY91 577 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 MAGIXQ9H6Y5 334 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 CDH20Q9HBT6 801 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 TMEM9Q9P0T7 183 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 UBR3Q6ZT12 1888 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 MRPL3P09001 348 aaKnown RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 H2BFMP0C1H6 154 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 AHRP35869 848 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 CCR2P41597 374 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GLP1RP43220 463 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 SLC6A8P48029 635 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 FAM109BQ6ICB4 259 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 TMEM184AQ6ZMB5 413 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 SNX29P2Q8IUI4 249 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 TMEM178AQ8NBL3 297 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 OR9A2Q8NGT5 310 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 PDXPQ96GD0 296 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 IER2Q9BTL4 223 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 WASH6PQ9NQA3 447 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 IL37Q9NZH6 218 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 C5AR2Q9P296 337 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 WASF3Q9UPY6 502 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 PCDHGA10Q9Y5H3 936 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 DOCK1Q14185 1865 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 A6NLC8 198 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 RASAL1O95294 804 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ATXN1LP0C7T5 689 aaKnown RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GNG2P59768 71 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ERVPABLB-1P60509 514 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 CRYZQ08257 329 aaKnown RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 TRAM1Q15629 374 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 SPIN3Q5JUX0 258 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 LINC00696Q6ZRV3 163 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF367Q7RTV3 350 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ABHD12BQ7Z5M8 362 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 MFSD9Q8NBP5 474 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 OR14A16Q8NHC5 309 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 TMEM41AQ96HV5 264 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 OR5B2Q96R09 309 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 NANSQ9NR45 359 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 CMAHPQ9Y471 501 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 IGLV3-10A0A075B6K4 115 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ST3GAL4Q11206 333 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 MFSD13AQ14CX5 517 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GLT8D1Q68CQ7 371 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 CCSAPQ6IQ19 270 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 DPH2Q9BQC3 489 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 MOV10Q9HCE1 1003 aaKnown RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 DDX60LQ5H9U9 1706 aaKnown RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 A0A0G2JPF8 293 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 A0A1W2PPC4 97 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GRXCR2A6NFK2 248 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 HNRNPCL3B7ZW38 293 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ANHXE9PGG2 379 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GPR39O43194 453 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 HNRNPCL4P0DMR1 293 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 C7P10643 843 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GGT2P36268 569 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ENTPD1P49961 510 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ZMYND11Q15326 602 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF404Q494X3 552 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GXYLT1Q4G148 440 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 UBE2Q1Q7Z7E8 422 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 GOLM1Q8NBJ4 401 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 INO80EQ8NBZ0 244 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 FKBP10Q96AY3 582 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ECHDC3Q96DC8 303 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 TMEM185BQ9H7F4 350 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 C14orf166Q9Y224 244 aaKnown RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 SPEF1Q9Y4P9 236 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 TMEM14AQ9Y6G1 99 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 R4GN57 208 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 FOXE1O00358 373 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-221ENST00000532331 AP1G1O43747 822 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 CEBPGP53567 150 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 ERV3-1Q14264 604 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 RAB39AQ14964 217 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF595Q8IYB9 648 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF611Q8N823 705 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 APIPQ96GX9 242 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 MUS81Q96NY9 551 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 CITED4Q96RK1 184 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 MROQ9BYG7 248 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 VDAC3Q9Y277 283 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 E2F3O00716 465 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 XPNPEP2O43895 674 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 SSR4P51571 173 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 CDKL1Q00532 357 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 STK11Q15831 433 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 ASTLQ6HA08 431 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-221ENST00000532331 PGBD5Q8N414 524 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 ENDOVQ8N8Q3 282 aaKnown RBP10.66□□□□□ -0.7
PTPRK-221ENST00000532331 OR52N2Q8NGI0 321 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 OR1E3Q8WZA6 343 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 TTTY10Q9BZA0 68 aa10.66□□□□□ -0.7
PTPRK-221ENST00000532331 CD93Q9NPY3 652 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms