RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 DGAT2Q96PD7 388 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 KCNK17Q96T54 332 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 UTP23Q9BRU9 249 aaKnown RBP8.69□□□□□ -1.02
VPS26B-207ENST00000532160 BRINP2Q9C0B6 783 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 MMP25Q9NPA2 562 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 SLC35C2Q9NQQ7 365 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 NPIPA1Q9UND3 350 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 MEMO1Q9Y316 297 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 PCDHGB6Q9Y5F9 930 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 ZNF407Q9C0G0 2248 aa8.69□□□□□ -1.02
VPS26B-207ENST00000532160 HRKO00198 91 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 NME6O75414 186 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-207ENST00000532160 NEURL1O76050 574 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 CT62P0C5K7 136 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 CPMP14384 443 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 IDO1P14902 403 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 UQCRBP14927 111 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 CD46P15529 392 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PORP16435 677 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-207ENST00000532160 AGAP20933 346 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PRPS1L1P21108 318 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 NT5EP21589 574 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 GPX3P22352 226 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 GSTM5P46439 218 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 STT3AP46977 705 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 CPA2P48052 419 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 SMSP52788 366 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 SLC26A5P58743 744 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 STX1BP61266 288 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PHC1P78364 1004 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 IGLV3-21P80748 117 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-207ENST00000532160 SLC25A3Q00325 362 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 HSF1Q00613 529 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PLIN5Q00G26 463 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PDE7AQ13946 482 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 EXT1Q16394 746 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 FAM174BQ3ZCQ3 159 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PDCD4Q53EL6 469 aaKnown RBP8.68□□□□□ -1.02
VPS26B-207ENST00000532160 COQ5Q5HYK3 327 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 RNFT1Q5M7Z0 435 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 SPANXN4Q5MJ08 99 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 CPTPQ5TA50 214 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 OR4F3Q6IEY1 312 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 FAM111BQ6SJ93 734 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 C3P1Q6ZMU1 363 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 GK5Q6ZS86 529 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ZNF551Q7Z340 670 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-207ENST00000532160 GALNTL5Q7Z4T8 443 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-207ENST00000532160 MIER2Q8N344 545 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ZNF321PQ8N8H1 164 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 SIMC1Q8NDZ2 872 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 OR9A2Q8NGT5 310 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 KAT2AQ92830 837 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ROPN1LQ96C74 230 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 LRGUKQ96M69 825 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ZNF681Q96N22 645 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 BBS4Q96RK4 519 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 DUSP26Q9BV47 211 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 TRIM15Q9C019 465 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 MUC13Q9H3R2 512 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 GLIPR2Q9H4G4 154 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ZNF385DQ9H6B1 395 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ANKRA2Q9H9E1 313 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ATP6V1HQ9UI12 483 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ITGB1BP2Q9UKP3 347 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 PSME2Q9UL46 239 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 RAB26Q9ULW5 256 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 ZNF780BQ9Y6R6 833 aa8.68□□□□□ -1.02
VPS26B-207ENST00000532160 NF1P21359 2839 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 LOC100653049A0A140TA62 436 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 SMIM31A0A1B0GVY4 71 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 MYO1GB0I1T2 1018 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 C17orf105B2RV13 164 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 NR5A2O00482 541 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 PDPK1O15530 556 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 DENRO43583 198 aaKnown RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 ASNA1O43681 348 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 AHCYL1O43865 530 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 SLC22A3O75751 556 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 BCAS2O75934 225 aaPredicted RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 KRT34O76011 436 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 CLDN14O95500 239 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 NPPAP01160 153 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 SLC35E2P0CK97 266 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 HOXB6P17509 224 aaKnown RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 CSNK2A2P19784 350 aaPredicted RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 ZFP36L2P47974 494 aaKnown RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 MRPL19P49406 292 aaKnown RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 CDK9P50750 372 aaKnown RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 NCBP2P52298 156 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 WNT3P56703 355 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 RIPPLY3P57055 190 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 OC90Q02509 493 aaPredicted RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 HSPB3Q12988 150 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 SERTAD2Q14140 314 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 FLOT2Q14254 428 aa8.67□□□□□ -1.02
VPS26B-207ENST00000532160 ZNF267Q14586 743 aaPredicted RBP8.67□□□□□ -1.02
VPS26B-207ENST00000532160 EXOSC7Q15024 291 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms