RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 GAS1P54826 345 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 FOXA1P55317 472 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 MRPS22P82650 360 aaKnown RBP15.27■□□□□ 0.04
CPSF1-207ENST00000531727 C2orf80Q0P641 193 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 FOXF2Q12947 444 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 AAGABQ6PD74 315 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 SLC44A2Q8IWA5 706 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-207ENST00000531727 CCNYL1Q8N7R7 359 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 KIF18AQ8NI77 898 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 WNT2BQ93097 391 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 G6PC3Q9BUM1 346 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 SFXN3Q9BWM7 321 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 DKKL1Q9UK85 242 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 HRNRQ86YZ3 2850 aaPredicted RBP15.27■□□□□ 0.03
CPSF1-207ENST00000531727 CLCA1A8K7I4 914 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 COQ9O75208 318 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 GLRA3O75311 464 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 SLITRK5O94991 958 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 MYL2P10916 166 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 CHMP24386 653 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 DNASE1P24855 282 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 STARP49675 285 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 NAA20P61599 178 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 PSG6Q00889 435 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 ZNF155Q12901 538 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-207ENST00000531727 IMPG1Q17R60 797 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 PRSS53Q2L4Q9 553 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 OR5M10Q6IEU7 315 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 ZYG11AQ6WRX3 759 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 CHDHQ8NE62 594 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-207ENST00000531727 OR4N2Q8NGD1 307 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 CDC26Q8NHZ8 85 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 EFHD2Q96C19 240 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-207ENST00000531727 SFXN2Q96NB2 322 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 MIEF1Q9NQG6 463 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 CLCF1Q9UBD9 225 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 GRID1Q9ULK0 1009 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 PLEKHA6Q9Y2H5 1048 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 OR10H1Q9Y4A9 318 aa15.26■□□□□ 0.03
CPSF1-207ENST00000531727 A0A087WV62 115 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 A0A1W2PPM1 405 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 B4DXG7 233 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 H3BQF6 201 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 PLOD2O00469 737 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 ZIC3O60481 467 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 JUNP05412 331 aaKnown RBP15.25■□□□□ 0.03
CPSF1-207ENST00000531727 ZNF708P17019 499 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 DPP4P27487 766 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 MC3RP41968 323 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 NCBP2P52298 156 aaKnown RBP eCLIP15.25■□□□□ 0.03
CPSF1-207ENST00000531727 CLDN18P56856 261 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 FAM71E1Q6IPT2 247 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 PLXDC2Q6UX71 529 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 TRIM46Q7Z4K8 759 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 FAM76AQ8TAV0 307 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 LINC01560Q8TB33 94 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.25■□□□□ 0.038e-13■■□□□ 11.7
CPSF1-207ENST00000531727 INTS12Q96CB8 462 aaKnown RBP15.25■□□□□ 0.03
CPSF1-207ENST00000531727 RHOXF2Q9BQY4 288 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 TMUB1Q9BVT8 246 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 RBM24Q9BX46 236 aaKnown RBP15.25■□□□□ 0.03
CPSF1-207ENST00000531727 ACBD3Q9H3P7 528 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 MYNNQ9NPC7 610 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 TAS2R7Q9NYW3 318 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 RPH3AQ9Y2J0 694 aaPredicted RBP15.25■□□□□ 0.03
CPSF1-207ENST00000531727 POLR3HQ9Y535 204 aaPredicted RBP15.25■□□□□ 0.03
CPSF1-207ENST00000531727 SPG11Q96JI7 2443 aa15.25■□□□□ 0.03
CPSF1-207ENST00000531727 ANKHD1Q8IWZ3 2542 aaKnown RBP15.24■□□□□ 0.03
CPSF1-207ENST00000531727 HCRTR2O43614 444 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 RSL1D1O76021 490 aaKnown RBP15.24■□□□□ 0.03
CPSF1-207ENST00000531727 GOSR1O95249 250 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 PROCP04070 461 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 CD99P14209 185 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 NTSP30990 170 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 EVI2BP34910 448 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 DSCR4P56555 118 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-207ENST00000531727 GAB1Q13480 694 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 BCL2A1Q16548 175 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 CYP27C1Q4G0S4 372 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 SH2D4BQ5SQS7 431 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 FBXW10Q5XX13 1052 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 TMEM107Q6UX40 140 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 PAMR1Q6UXH9 720 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 FRMD7Q6ZUT3 714 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 SH2D5Q6ZV89 423 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 LUZP2Q86TE4 346 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 TGIF2LYQ8IUE0 185 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 GRAMD2AQ8IUY3 354 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 GCNT2Q8N0V5 402 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 FADS6Q8N9I5 356 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 OR4K17Q8NGC6 315 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 PIGMQ9H3S5 423 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 GALNT8Q9NY28 637 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 PPP4R1LQ9P1A2 415 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 C19orf53Q9UNZ5 99 aaPredicted RBP15.24■□□□□ 0.03
CPSF1-207ENST00000531727 WBP11Q9Y2W2 641 aaKnown RBP15.24■□□□□ 0.03
CPSF1-207ENST00000531727 MED12Q93074 2177 aa15.24■□□□□ 0.03
CPSF1-207ENST00000531727 ZNF469Q96JG9 3925 aaPredicted RBP15.23■□□□□ 0.03
CPSF1-207ENST00000531727 C17orf51A8MQB3 221 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 UPK1AO00322 258 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms