RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 ACOX3O15254 700 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 ZNF354AO60765 605 aaPredicted RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 TNFRSF21O75509 655 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 ABCD3P28288 659 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 MRPS22P82650 360 aaKnown RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 TXNL4AP83876 142 aaKnown RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 HPCAP84074 193 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 DECR1Q16698 335 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 MEP1AQ16819 746 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 LACTB2Q53H82 288 aaPredicted RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 ACER2Q5QJU3 275 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 EXOSC6Q5RKV6 272 aaKnown RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 BCORP1Q8N888 145 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 KDF1Q8NAX2 398 aaPredicted RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 OR2T12Q8NG77 320 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 APOBEC4Q8WW27 367 aaKnown RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 MCUR1Q96AQ8 359 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 EFHD2Q96C19 240 aaPredicted RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 CLPTM1LQ96KA5 538 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 ZNF354BQ96LW1 612 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 RASL10BQ96S79 203 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 KCTD14Q9BQ13 255 aaPredicted RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 ZBTB20Q9HC78 741 aaPredicted RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 THUMPD1Q9NXG2 353 aaKnown RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 GIN1Q9NXP7 522 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 STMN3Q9NZ72 180 aa16.3■□□□□ 0.2
CTSB-222ENST00000531551 YARS2Q9Y2Z4 477 aaKnown RBP16.3■□□□□ 0.2
CTSB-222ENST00000531551 PRAMEF27A3QJZ7 478 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 PRORSD1PA6NEY8 169 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 C5orf58C9J3I9 102 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 REM1O75628 298 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 DNAJC8O75937 253 aaPredicted RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 PDE5AO76074 875 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 SOX30O94993 753 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 KCNK2O95069 426 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 ALPPP05187 535 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 MSX2P35548 267 aaPredicted RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 MAGEA8P43361 318 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 GSK3BP49841 420 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 EEFSECP57772 596 aaKnown RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 MLF1P58340 268 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 CYP27C1Q4G0S4 372 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 PIGGQ5H8A4 983 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 SAMD4BQ5PRF9 694 aaKnown RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 ABHD17BQ5VST6 288 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 H3F3CQ6NXT2 135 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 TMEM156Q8N614 296 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 ANKFN1Q8N957 763 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 FDCSPQ8NFU4 85 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 OR5M3Q8NGP4 307 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 NFKBIDQ8NI38 313 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 OMA1Q96E52 524 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 FBXO34Q9NWN3 711 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 ANKRD10Q9NXR5 420 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 NPFFR2Q9Y5X5 522 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 GSC2O15499 205 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 F10P00742 488 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 IL12BP29460 328 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 PGM1P36871 562 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 PIGAP37287 484 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 GZMMP51124 257 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 SSR4P51571 173 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 CDK6Q00534 326 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 FUT5Q11128 374 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 SCARB2Q14108 478 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 ADRM1Q16186 407 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 AGAP7PQ5VUJ5 663 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 CALHM3Q86XJ0 350 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 PTOV1Q86YD1 416 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 APLFQ8IW19 511 aaPredicted RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 ZZZ3Q8IYH5 903 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 SLC34A3Q8N130 599 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 SLC38A5Q8WUX1 472 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 ASB15Q8WXK1 588 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 TMEM19Q96HH6 336 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 AGAP4Q96P64 663 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 ADOQ96SZ5 270 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 CADM1Q9BY67 442 aaKnown RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 LRMDAQ9H2I8 198 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 MRTO4Q9UKD2 239 aaKnown RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 PRPF19Q9UMS4 504 aaKnown RBP16.29■□□□□ 0.2
CTSB-222ENST00000531551 LIPT1Q9Y234 373 aa16.29■□□□□ 0.2
CTSB-222ENST00000531551 FAM220BPB1ANY3 271 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 TO15178 435 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 NADKO95544 446 aaPredicted RBP16.28■□□□□ 0.2
CTSB-222ENST00000531551 TFPTP0C1Z6 253 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 BMP2P12643 396 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 ATP6V1C1P21283 382 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 SOX8P57073 446 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 CEACAM7Q14002 265 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 ARHGAP11BQ3KRB8 267 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 CRB2Q5IJ48 1285 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 RPS26P11Q5JNZ5 115 aaPredicted RBP16.28■□□□□ 0.2
CTSB-222ENST00000531551 HEPHL1Q6MZM0 1159 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 BORAQ6PGQ7 559 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 IL20RBQ6UXL0 311 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 YTHDF3Q7Z739 585 aaKnown RBP16.28■□□□□ 0.2
CTSB-222ENST00000531551 BEST3Q8N1M1 668 aa16.28■□□□□ 0.2
CTSB-222ENST00000531551 C11orf65Q8NCR3 313 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms