RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TXNL4AP83876 142 aaKnown RBP13.3□□□□□ -0.28
CPSF1-206ENST00000531480 LASP1Q14847 261 aaKnown RBP13.3□□□□□ -0.28
CPSF1-206ENST00000531480 NNATQ16517 81 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 DUSP5Q16690 384 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 AGKQ53H12 422 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 ZNF324BQ6AW86 544 aaPredicted RBP13.3□□□□□ -0.28
CPSF1-206ENST00000531480 NUP54Q7Z3B4 507 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 C6orf120Q7Z4R8 191 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 YTHDF3Q7Z739 585 aaKnown RBP13.3□□□□□ -0.28
CPSF1-206ENST00000531480 FBXW8Q8N3Y1 598 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 TRIML2Q8N7C3 387 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 OR10G3Q8NGC4 313 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 OR4N2Q8NGD1 307 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 OR5AK3PQ8NH89 298 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 SPPL2AQ8TCT8 520 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 DIO2Q92813 273 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 TMBIM1Q969X1 311 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 TMEM125Q96AQ2 219 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 ITCHQ96J02 903 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 C5orf34Q96MH7 638 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 TAAR6Q96RI8 345 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 PAIP1Q9H074 479 aaKnown RBP13.3□□□□□ -0.28
CPSF1-206ENST00000531480 PIGUQ9H490 435 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 Q9N2J8 555 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 SLC6A13Q9NSD5 602 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 DEPPQ9NTK1 212 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 CNIH4Q9P003 139 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 CNOT11Q9UKZ1 510 aaKnown RBP13.3□□□□□ -0.28
CPSF1-206ENST00000531480 CBLCQ9ULV8 474 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 A0A096LPI6 279 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 TRBV5-3A0A0A0MS03 114 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 RFXANKO14593 260 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 TP53I11O14683 189 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 ASNA1O43681 348 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 UGT2B11O75310 529 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 CPSF4O95639 269 aaKnown RBP13.29□□□□□ -0.28
CPSF1-206ENST00000531480 IL33O95760 270 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 CCL3P10147 92 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 MVDP53602 400 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 PRKAG1P54619 331 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 FBXW4P57775 412 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 PLCXD2Q0VAA5 305 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 SNTA1Q13424 505 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 TP53BP2Q13625 1128 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.29□□□□□ -0.286e-8■■■■■ 50.8
CPSF1-206ENST00000531480 SLC22A10Q63ZE4 541 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 GALNTL5Q7Z4T8 443 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 WDR53Q7Z5U6 358 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-206ENST00000531480 DPP10Q8N608 796 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 BCORP1Q8N888 145 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 ZFP62Q8NB50 900 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-206ENST00000531480 ZFP90Q8TF47 636 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 FRMD6Q96NE9 622 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 SLC35A5Q9BS91 424 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 NMUR2Q9GZQ4 415 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 EQTNQ9NQ60 294 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 VPS4AQ9UN37 437 aa13.29□□□□□ -0.28
CPSF1-206ENST00000531480 NINQ8N4C6 2090 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 KLRC4-KLRK1H3BQV0 150 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 NR5A2O00482 541 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 ADAM10O14672 748 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 GUSBP08236 651 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 ALOX5P09917 674 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 CNR1P21554 472 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 LCN1P31025 176 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 GABRA3P34903 492 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 PTGDSP41222 190 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 MRPS22P82650 360 aaKnown RBP13.28□□□□□ -0.28
CPSF1-206ENST00000531480 FOXO1Q12778 655 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 KLF10Q13118 480 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 EFR3AQ14156 821 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 MAPRE2Q15555 327 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 DECR1Q16698 335 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 HYAL4Q2M3T9 481 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 SPDYE7PQ495Y7 208 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 COQ5Q5HYK3 327 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 PAGE3Q5JUK9 113 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 TBCELQ5QJ74 424 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 SLC2A7Q6PXP3 512 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 GK5Q6ZS86 529 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 SULF2Q8IWU5 870 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 MSRB3Q8IXL7 192 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 PRR22Q8IZ63 422 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 CLEC4FQ8N1N0 589 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 POGLUT1Q8NBL1 392 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 CHDHQ8NE62 594 aaPredicted RBP13.28□□□□□ -0.28
CPSF1-206ENST00000531480 DNAJB8Q8NHS0 232 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 SNRNP40Q96DI7 357 aaKnown RBP13.28□□□□□ -0.28
CPSF1-206ENST00000531480 CMTM5Q96DZ9 223 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 COL21A1Q96P44 957 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 BTBD2Q9BX70 525 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 ANGPTL4Q9BY76 406 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 MYLK2Q9H1R3 596 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 SACM1LQ9NTJ5 587 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 FAF1Q9UNN5 650 aaPredicted RBP13.28□□□□□ -0.28
CPSF1-206ENST00000531480 NTNG1Q9Y2I2 539 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 OR10H1Q9Y4A9 318 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 PCDHB14Q9Y5E9 798 aa13.28□□□□□ -0.28
CPSF1-206ENST00000531480 GXYLT2A0PJZ3 443 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 DUXAA6NLW8 204 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms