RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PI4KAP1Q8N8J0 262 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 BANPQ8N9N5 519 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 THAP8Q8NA92 274 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 CAPSLQ8WWF8 208 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 OR1E3Q8WZA6 343 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 TNFRSF14Q92956 283 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 ISG20Q96AZ6 181 aaKnown RBP2.99□□□□□ -1.93
PTPRK-220ENST00000531466 TMEM186Q96B77 213 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 RASD2Q96D21 266 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 ELMO2Q96JJ3 720 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 LURAP1Q96LR2 239 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 TSNARE1Q96NA8 513 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 APOL2Q9BQE5 337 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 DRC3Q9H069 523 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 OR51V1Q9H2C8 321 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 RMND5AQ9H871 391 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 NTN4Q9HB63 628 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 SYTL2Q9HCH5 934 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 BATF3Q9NR55 127 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 NKIRAS1Q9NYS0 192 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 IL17CQ9P0M4 197 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 RCOR3Q9P2K3 495 aaPredicted RBP2.99□□□□□ -1.93
PTPRK-220ENST00000531466 CIDEBQ9UHD4 219 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 CDH7Q9ULB5 785 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 STRAPQ9Y3F4 350 aaKnown RBP2.99□□□□□ -1.93
PTPRK-220ENST00000531466 U3KQV3 271 aa2.99□□□□□ -1.93
PTPRK-220ENST00000531466 NPHP3Q7Z494 1330 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 LOC390937A0A1W2PQ73 354 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 TMEM120BA0PK00 339 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 OOEPA6NGQ2 149 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF716A6NP11 495 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CENPBD1B2RD01 187 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 DNALI1O14645 258 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 GATCO43716 136 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 MFN2O95140 757 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SIX3O95343 332 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 GAS8O95995 478 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 APOEP02649 317 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 PCCBP05166 539 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 IL6P05231 212 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SUPT20HL2P0C7V6 817 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF735P0CB33 412 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 F3P13726 295 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 MYOGP15173 224 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 PRKACAP17612 351 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ATF6P18850 670 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 RAB4AP20338 218 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 HNRNPA2B1P22626 353 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CPN2P22792 545 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 LMO2P25791 158 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 PTPN4P29074 926 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ALDH3A1P30838 453 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 OTX2P32243 289 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CDKN1BP46527 198 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 POU3F4P49335 361 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 FHITP49789 147 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 RGS7P49802 495 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF75DP51815 510 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SUCLG1P53597 346 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CDH6P55285 790 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 TNFRSF17Q02223 184 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 KLC1Q07866 573 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 OVGP1Q12889 678 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ITGB3BPQ13352 177 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SIX1Q15475 284 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 NDUFA5Q16718 116 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ZRANB3Q5FWF4 1079 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 UTF1Q5T230 341 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SPECC1LQ69YQ0 1117 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 NEPROQ6NW34 567 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CCDC121Q6ZUS5 278 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 USP50Q70EL3 339 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SLC51BQ86UW2 128 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 FAM89BQ8N5H3 189 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 TRPV3Q8NET8 790 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 HEXDCQ8WVB3 486 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 TSEN15Q8WW01 171 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 MRPS27Q92552 414 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 FRAT1Q92837 279 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 EXT2Q93063 718 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 NT5C3BQ969T7 300 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CIDECQ96AQ7 238 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SLC25A36Q96CQ1 311 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CCM2Q9BSQ5 444 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 RBM24Q9BX46 236 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ANKRD2Q9GZV1 360 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 RHBGQ9H310 441 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 VCX2Q9H322 139 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CUEDC2Q9H467 287 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 METTL8Q9H825 291 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 NT5MQ9NPB1 228 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 DMAP1Q9NPF5 467 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 NGBQ9NPG2 151 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 EQTNQ9NQ60 294 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 CHRAC1Q9NRG0 131 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ETNK2Q9NVF9 386 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 DNAJC11Q9NVH1 559 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SMPD3Q9NY59 655 aaPredicted RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 MRPL39Q9NYK5 338 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 SPASTQ9UBP0 616 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms