RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TMEM151AQ8N4L1 468 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 CNEP1R1Q8N9A8 125 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 STARD4Q96DR4 205 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 WFIKKN1Q96NZ8 548 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 CDC42EP4Q9H3Q1 356 aaKnown RBP16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 FOLH1BQ9HBA9 442 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 NMRK1Q9NWW6 199 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 PRR14LQ5THK1 2151 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 DEFB108AA8MXU0 73 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 TRIM49D1C9J1S8 452 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 POC1B-GALNT4F8VUJ3 575 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 MSTNO14793 375 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 SCO2O43819 266 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 PCDH7O60245 1069 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 COL6A2P12110 1019 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 HSD17B3P37058 310 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 CLCQ05315 142 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 EFR3AQ14156 821 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 ERCC6LQ2NKX8 1250 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 TEX35Q5T0J7 233 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 SCIMPQ6UWF3 145 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 SLC44A2Q8IWA5 706 aaPredicted RBP16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 UHMK1Q8TAS1 419 aaKnown RBP16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 RNF138Q8WVD3 245 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 FAM111AQ96PZ2 611 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 C1QTNF3Q9BXJ4 246 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 FUT8Q9BYC5 575 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 OPN3Q9H1Y3 402 aaPredicted RBP16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 MCM8Q9UJA3 840 aa16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 MRPS18CQ9Y3D5 142 aaKnown RBP16.65■□□□□ 0.26
SSSCA1-206ENST00000531405 GNG14A0A1W2PPG7 69 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 SLC22A20A6NK97 555 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 H0YC42 278 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 CTIFO43310 598 aaKnown RBP16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 BCAS2O75934 225 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 CCKARP32238 428 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 HTR6P50406 440 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 SERPINB9P50453 376 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 TPD52P55327 224 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 CLDN15P56746 228 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 ETF1P62495 437 aaKnown RBP16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 SIRPAP78324 504 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF474Q6S9Z5 364 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 TAOK1Q7L7X3 1001 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 BTLAQ7Z6A9 289 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 P3H2Q8IVL5 708 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 CIARTQ8N365 385 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 OR7G2Q8NG99 324 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 OR4K17Q8NGC6 315 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 DCAKDQ8WVC6 231 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 FIG4Q92562 907 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 MTBPQ96DY7 904 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 ARSGQ96EG1 525 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 PIK3IP1Q96FE7 263 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 PGM2Q96G03 612 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 APIPQ96GX9 242 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 EBPLQ9BY08 206 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 ACPTQ9BZG2 426 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 DSN1Q9H410 356 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 FLRT3Q9NZU0 649 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 PPP4R1LQ9P1A2 415 aa16.64■□□□□ 0.25
SSSCA1-206ENST00000531405 CSPG4Q6UVK1 2322 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 SMPD2O60906 423 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 SUPT7LO94864 414 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 LY6G6DO95868 133 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 HEXAP06865 529 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 EVI2BP34910 448 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 CD79BP40259 229 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 PNLIPRP2P54317 469 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 DSCR4P56555 118 aaPredicted RBP16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 EEF1A1P68104 462 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF155Q12901 538 aaPredicted RBP16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 CSTF3Q12996 717 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 UNC50Q53HI1 259 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 SH2D4BQ5SQS7 431 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 EEF1A1P5Q5VTE0 462 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 CHMP1BQ7LBR1 199 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 RELL1Q8IUW5 271 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 OR5M1Q8NGP8 315 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 C16orf78Q8WTQ4 265 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 ERP27Q96DN0 273 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 MED18Q9BUE0 208 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 UBTD1Q9HAC8 227 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 SENP1Q9P0U3 644 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 OR10H1Q9Y4A9 318 aa16.63■□□□□ 0.25
SSSCA1-206ENST00000531405 SEC14L5O43304 696 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 ARHGEF9O43307 516 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 KRT6AP02538 564 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 KRT6BP04259 564 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 CRHP06850 196 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 PEPDP12955 493 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 HSD3B1P14060 373 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 HK1P19367 917 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 HSD3B2P26439 372 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 MC3RP41968 323 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 KIR2DL2P43627 348 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 KRT6CP48668 564 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 SUCLG1P53597 346 aaKnown RBP16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 BTKQ06187 659 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms