RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZNF681Q96N22 645 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SFXN2Q96NB2 322 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 TRIB1Q96RU8 372 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PRPF18Q99633 342 aaKnown RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 CCT7Q99832 543 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 ANGPTL4Q9BY76 406 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 TBL1XR1Q9BZK7 514 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 GLIPR2Q9H4G4 154 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 REEP4Q9H6H4 257 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 TNFRSF12AQ9NP84 129 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SERHLQ9NQF3 203 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SDHAF3Q9NRP4 125 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SPRR3Q9UBC9 169 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 BAIAP2L1Q9UHR4 511 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 CBLCQ9ULV8 474 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 RPH3AQ9Y2J0 694 aaPredicted RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 C15orf41Q9Y2V0 281 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 WBP11Q9Y2W2 641 aaKnown RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SETXQ7Z333 2677 aaKnown RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 FLNCQ14315 2725 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 USP9XQ93008 2570 aaPredicted RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 EXPH5Q8NEV8 1989 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ANKRD33BA6NCL7 494 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 OR6C70A6NIJ9 312 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 MYO1GB0I1T2 1018 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ICOSLGO75144 302 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 IL2RAP01589 272 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 PRPS2P11908 318 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 CYP4B1P13584 511 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 CREB1P16220 341 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 SDC1P18827 310 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 S1PR1P21453 382 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 TACR1P25103 407 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 GABRA3P34903 492 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 SERPINB4P48594 390 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 CDK9P50750 372 aaKnown RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 DGKQP52824 942 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 PRR5P85299 388 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF844Q08AG5 666 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 MGAT2Q10469 447 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 MYBPHQ13203 477 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 MAD2L1Q13257 205 aaPredicted RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 HYAL4Q2M3T9 481 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 RAET1LQ5VY80 246 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 TIGD3Q6B0B8 471 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ENPP6Q6UWR7 440 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 FAM83FQ8NEG4 500 aaPredicted RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 NUP43Q8NFH3 380 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 OR2T11Q8NH01 316 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 CEP70Q8NHQ1 597 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 SMPDL3BQ92485 455 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 RMND5BQ96G75 393 aaPredicted RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 METTL2AQ96IZ6 378 aaKnown RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 EGLN2Q96KS0 407 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ZIM3Q96PE6 472 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 DMRTA2Q96SC8 542 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 YIPF4Q9BSR8 244 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 UCK2Q9BZX2 261 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 SH2D2AQ9NP31 389 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ACKR4Q9NPB9 350 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ZCCHC3Q9NUD5 404 aaKnown RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ATAD3AQ9NVI7 634 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ARGLU1Q9NWB6 273 aaPredicted RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 SIRT5Q9NXA8 310 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 NKIRAS1Q9NYS0 192 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 GIMAP2Q9UG22 337 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF639Q9UID6 485 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 GPR55Q9Y2T6 319 aaPredicted RBP8.3□□□□□ -1.08
CMTM1-210ENST00000528441 DNAJC15Q9Y5T4 150 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 WIF1Q9Y5W5 379 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 PCNX1Q96RV3 2341 aa8.3□□□□□ -1.08
CMTM1-210ENST00000528441 COL12A1Q99715 3063 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 NCKAP5O14513 1909 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 FREM3P0C091 2139 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 A0A087WV62 115 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 A0A1B0GVC2 190 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 EEF1E1-BLOC1S5C9J1V9 151 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 DVL2O14641 736 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 LSM1O15116 133 aaKnown RBP8.29□□□□□ -1.08
CMTM1-210ENST00000528441 TM9SF1O15321 606 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 EEF1E1O43324 174 aaKnown RBP8.29□□□□□ -1.08
CMTM1-210ENST00000528441 PLOD3O60568 738 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 TRIM3O75382 744 aaPredicted RBP8.29□□□□□ -1.08
CMTM1-210ENST00000528441 LYPLA1O75608 230 aaPredicted RBP8.29□□□□□ -1.08
CMTM1-210ENST00000528441 CBR3O75828 277 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 ZWINTO95229 277 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 SERPINE1P05121 402 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 HOXD4P09016 255 aaPredicted RBP8.29□□□□□ -1.08
CMTM1-210ENST00000528441 ALOX5P09917 674 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 ATP6V1C1P21283 382 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 BMP5P22003 454 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 PRPH2P23942 346 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 GRK2P25098 689 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 UQCRC1P31930 480 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 EVI2BP34910 448 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 PTGER4P35408 488 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 PRIM2P49643 509 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 PNLIPRP2P54317 469 aa8.29□□□□□ -1.08
CMTM1-210ENST00000528441 ABCE1P61221 599 aaKnown RBP8.29□□□□□ -1.08
CMTM1-210ENST00000528441 SNTA1Q13424 505 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms