RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 SLC36A4Q6YBV0 504 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ZNF730Q6ZMV8 503 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 FRRS1Q6ZNA5 592 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 PEX5LQ8IYB4 626 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 OR52I1Q8NGK6 324 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ACOT11Q8WXI4 607 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 ZG16BQ96DA0 208 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 SLC38A2Q96QD8 506 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 NEURL2Q9BR09 285 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 POLR2J2Q9GZM3 115 aaKnown RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 C8orf33Q9H7E9 229 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 ANKRA2Q9H9E1 313 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 FGF20Q9NP95 211 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 CTPS2Q9NRF8 586 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 CRNNQ9UBG3 495 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 STUB1Q9UNE7 303 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ZNF232Q9UNY5 417 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 HS3ST3A1Q9Y663 406 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ZSCAN9O15535 394 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 P2RX6O15547 441 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 UBXN7O94888 489 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 OR5F1O95221 314 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 IFI6P09912 130 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ACP2P11117 423 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 CKMT1AP12532 417 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 NDUFV2P19404 249 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 OMPP47874 163 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 TPMTP51580 245 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 RGS8P57771 180 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 CDC20Q12834 499 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 RUNX2Q13950 521 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 LARS2Q15031 903 aaKnown RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 ALG11Q2TAA5 492 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 DEFB134Q4QY38 66 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 EOGTQ5NDL2 527 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 MANEAQ5SRI9 462 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 C6orf132Q5T0Z8 1188 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 PRICKLE2Q7Z3G6 844 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 TRIM73Q86UV7 250 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 LYSMD2Q8IV50 215 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 TRIM48Q8IWZ4 208 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 SLC16A11Q8NCK7 471 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ITPKCQ96DU7 683 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ZFYVE21Q9BQ24 234 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 SAP130Q9H0E3 1048 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 DOLKQ9UPQ8 538 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 ZNF443Q9Y2A4 671 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 GPR55Q9Y2T6 319 aaPredicted RBP14.36□□□□□ -0.11
USH1C-207ENST00000527720 SCN2AQ99250 2005 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 CPSF4LA6NMK7 179 aaKnown RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 ZIC2O95409 532 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 THBS1P07996 1170 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 HBQ1P09105 142 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 CPMP14384 443 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 POLR2CP19387 275 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 FPR3P25089 353 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 STAT5AP42229 794 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 LSM11P83369 360 aaKnown RBP eCLIP14.35□□□□□ -0.11
USH1C-207ENST00000527720 ILF3Q12906 894 aaKnown RBP eCLIP14.35□□□□□ -0.11
USH1C-207ENST00000527720 DOC2BQ14184 412 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 GPR18Q14330 331 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 TMEM44Q2T9K0 475 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 PUS10Q3MIT2 529 aaKnown RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 EIPR1Q53HC9 387 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 AGAP7PQ5VUJ5 663 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 BCDIN3DQ7Z5W3 292 aaKnown RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 SNX29P2Q8IUI4 249 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 ZNF655Q8N720 491 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 ZCCHC10Q8TBK6 192 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 CDS1Q92903 461 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 TEX12Q9BXU0 123 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 PLA2G12AQ9BZM1 189 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 NUAK2Q9H093 628 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 C6orf106Q9H6K1 298 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 POLMQ9NP87 494 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 POT1Q9NUX5 634 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 WDR45Q9Y484 360 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 PIAS3Q9Y6X2 628 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 SPACA6W5XKT8 324 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 TRBV23OR9-2A0A075B6M9 112 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 OR6C74A6NCV1 312 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 NARSO43776 548 aaKnown RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 FCMRO60667 390 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 SNX4O95219 450 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 ALOX12P18054 663 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 TRHRP34981 398 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 RPS3AP61247 264 aaKnown RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 DLX2Q07687 328 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 DUSP8Q13202 625 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 MINDY4Q4G0A6 757 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 TYW3Q6IPR3 259 aaKnown RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 PLEKHM3Q6ZWE6 761 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 PARP16Q8N5Y8 322 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 OSTF1Q92882 214 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 RERGQ96A58 199 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 COL26A1Q96A83 441 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 MCHR1Q99705 422 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms