RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 CMKLR1Q99788 373 aa19.06■□□□□ 0.64
SMCO4-203ENST00000526869 RBM4BQ9BQ04 359 aaKnown RBP19.06■□□□□ 0.64
SMCO4-203ENST00000526869 RBM4Q9BWF3 364 aaKnown RBP19.06■□□□□ 0.64
SMCO4-203ENST00000526869 RSPO3Q9BXY4 272 aaPredicted RBP19.06■□□□□ 0.64
SMCO4-203ENST00000526869 AMBRA1Q9C0C7 1298 aa19.06■□□□□ 0.64
SMCO4-203ENST00000526869 SLC9A8Q9Y2E8 581 aa19.06■□□□□ 0.64
SMCO4-203ENST00000526869 FAM32AQ9Y421 112 aaKnown RBP19.06■□□□□ 0.64
SMCO4-203ENST00000526869 AP4B1Q9Y6B7 739 aa19.06■□□□□ 0.64
SMCO4-203ENST00000526869 CLCA3PQ9Y6N3 262 aa19.06■□□□□ 0.64
SMCO4-203ENST00000526869 ASCC3Q8N3C0 2202 aaKnown RBP19.06■□□□□ 0.64
SMCO4-203ENST00000526869 C4orf47A7E2U8 309 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 HRKO00198 91 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 MEN1O00255 615 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 ZIC2O95409 532 aaPredicted RBP19.05■□□□□ 0.64
SMCO4-203ENST00000526869 IGKV3-11P04433 115 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 ALPLP05186 524 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 RPS4Y1P22090 263 aaKnown RBP19.05■□□□□ 0.64
SMCO4-203ENST00000526869 OR1E2P47887 323 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 EFNA3P52797 238 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 RAB15P59190 212 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 PPP2R2BQ00005 443 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 PSG6Q00889 435 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 ZNF605Q86T29 641 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 CYP4Z1Q86W10 505 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 CARM1Q86X55 608 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 PEX5LQ8IYB4 626 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 C16orf52Q8NHV5 167 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 SENP5Q96HI0 755 aaPredicted RBP19.05■□□□□ 0.64
SMCO4-203ENST00000526869 WDR54Q9H977 334 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 PARD6AQ9NPB6 346 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 SMPD3Q9NY59 655 aaPredicted RBP19.05■□□□□ 0.64
SMCO4-203ENST00000526869 KCND3Q9UK17 655 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 NXT1Q9UKK6 140 aaKnown RBP19.05■□□□□ 0.64
SMCO4-203ENST00000526869 ZNF232Q9UNY5 417 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 SAMHD1Q9Y3Z3 626 aaKnown RBP19.05■□□□□ 0.64
SMCO4-203ENST00000526869 AK5Q9Y6K8 562 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 WDR87Q6ZQQ6 2873 aa19.05■□□□□ 0.64
SMCO4-203ENST00000526869 CUL9Q8IWT3 2517 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 AGAP5A6NIR3 686 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 DLGAP1O14490 977 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 BRINP1O60477 761 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 FCMRO60667 390 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 DIRAS1O95057 198 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 DDAH2O95865 285 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 DBIP07108 87 aaKnown RBP19.04■□□□□ 0.64
SMCO4-203ENST00000526869 CCL4P13236 92 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 NBL1P41271 181 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 IST1P53990 364 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 SLC37A1P57057 533 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 INSM1Q01101 510 aaPredicted RBP19.04■□□□□ 0.64
SMCO4-203ENST00000526869 MED21Q13503 144 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 LARS2Q15031 903 aaKnown RBP19.04■□□□□ 0.64
SMCO4-203ENST00000526869 NHSL2Q5HYW2 709 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 ZNF311Q5JNZ3 666 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 TBPL2Q6SJ96 375 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 OLIG3Q7RTU3 272 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 TMEM179BQ7Z7N9 219 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 PIP4P1Q86T03 277 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 MORN4Q8NDC4 146 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 OR52P1PQ8NH57 321 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 PIK3R3Q92569 461 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 NR4A3Q92570 626 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 LIN37Q96GY3 246 aaPredicted RBP19.04■□□□□ 0.64
SMCO4-203ENST00000526869 ARHGDIGQ99819 225 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 CTRCQ99895 268 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 ZPBPQ9BS86 351 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 LRFN3Q9BTN0 628 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 COL25A1Q9BXS0 654 aaPredicted RBP19.04■□□□□ 0.64
SMCO4-203ENST00000526869 EVA1AQ9H8M9 152 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 Q9N2J8 555 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 SLC39A1Q9NY26 324 aa19.04■□□□□ 0.64
SMCO4-203ENST00000526869 WDFY4Q6ZS81 3184 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 GXYLT2A0PJZ3 443 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 OR6C76A6NM76 312 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 KCNK2O95069 426 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 HEXBP07686 556 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 CDK4P11802 303 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 RRM2P31350 389 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 HMGA2P52926 109 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 EPS8Q12929 822 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 EIPR1Q53HC9 387 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 OTUD3Q5T2D3 398 aaPredicted RBP19.03■□□□□ 0.64
SMCO4-203ENST00000526869 NPSR1Q6W5P4 371 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 GLRX5Q86SX6 157 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 LAPTM4BQ86VI4 370 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 MARVELD2Q8N4S9 558 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 SLC2A12Q8TD20 617 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 MAGEE2Q8TD90 523 aaPredicted RBP19.03■□□□□ 0.64
SMCO4-203ENST00000526869 OIT3Q8WWZ8 545 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 DHRS1Q96LJ7 313 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 KLHL28Q9NXS3 571 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 SLC13A4Q9UKG4 626 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 ACAD8Q9UKU7 415 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 MKLN1Q9UL63 735 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 ZNF443Q9Y2A4 671 aaPredicted RBP19.03■□□□□ 0.64
SMCO4-203ENST00000526869 GPR55Q9Y2T6 319 aaPredicted RBP19.03■□□□□ 0.64
SMCO4-203ENST00000526869 LYVE1Q9Y5Y7 322 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 SEC16AO15027 2179 aa19.03■□□□□ 0.64
SMCO4-203ENST00000526869 OTOGLQ3ZCN5 2332 aa19.02■□□□□ 0.64
SMCO4-203ENST00000526869 EPPINO95925 133 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms