RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ARHGAP11AQ6P4F7 1023 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM81Q6P7N7 255 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 EPGNQ6UW88 154 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 LYPD8Q6UX82 237 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 NPSR1Q6W5P4 371 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 MSANTD1Q6ZTZ1 278 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 C16orf62Q7Z3J2 963 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ANKRD46Q86W74 232 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF227Q86WZ6 799 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF527Q8NB42 609 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SIMC1Q8NDZ2 872 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR4K17Q8NGC6 315 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR1J4Q8NGS1 313 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR5AK3PQ8NH89 298 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PSMA8Q8TAA3 256 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 FBXO30Q8TB52 745 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 STON2Q8WXE9 905 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 EFHD2Q96C19 240 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM120BQ96EK7 910 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 RMND5BQ96G75 393 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC35A4Q96G79 324 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ITCHQ96J02 903 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC35G5Q96KT7 338 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 MARK4Q96L34 752 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR52B2Q96RD2 323 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR52E6Q96RD3 313 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PANX1Q96RD7 426 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 STACQ99469 402 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 LMF2Q9BU23 707 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 BTBD2Q9BX70 525 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ANGPTL4Q9BY76 406 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ACTRT3Q9BYD9 372 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 TTTY12Q9BZ98 90 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 TBL1XR1Q9BZK7 514 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 NSRP1Q9H0G5 558 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CXorf36Q9H7Y0 433 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CACYBPQ9HB71 228 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SH2D2AQ9NP31 389 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SDR39U1Q9NRG7 319 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 DUSP22Q9NRW4 184 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 EXD2Q9NVH0 621 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 QPCTLQ9NXS2 382 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 TUBA8Q9NY65 449 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 NTMQ9P121 344 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 PPP4R1LQ9P1A2 415 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 BTNL2Q9UIR0 455 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 DCTN4Q9UJW0 460 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 CNOT11Q9UKZ1 510 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ABCG2Q9UNQ0 655 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 OSGIN2Q9Y236 505 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC5A6Q9Y289 635 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 GPR45Q9Y5Y3 372 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 TNRC6AQ8NDV7 1962 aaKnown RBP4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 LAMA5O15230 3695 aa4.96□□□□□ -1.62
HMGB1P40-201ENST00000525121 ATRXP46100 2492 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CPAMD8Q8IZJ3 1885 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TRGV5A0A0B4J1U4 118 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TRGV8A0A0C4DH27 118 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A0G2JMM0 328 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A1W2PPB8 328 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A1W2PRS3 328 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM234BA2RU67 622 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR14I1A6ND48 311 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM247A6NEH6 219 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCDC154A6NI56 674 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 KIR3DP1A8MWS1 328 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 H3BNH8 94 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 NR5A2O00482 541 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SCDO00767 359 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 RFXANKO14593 260 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 BCKDKO14874 412 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ANKRD28O15084 1053 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SCO2O43819 266 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TSPAN2O60636 221 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF354AO60765 605 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ICOSLGO75144 302 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TRAPPC6AO75865 159 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 PDE9AO76083 593 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 GLSO94925 669 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 NKX2-2O95096 273 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 UTS2O95399 124 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 KRT75O95678 551 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 IL33O95760 270 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TPOP07202 933 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ALDOCP09972 364 aaKnown RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ACP2P11117 423 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ESRRAP11474 423 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CYP4B1P13584 511 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 NCF2P19878 526 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 MST1P26927 711 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 EVI2BP34910 448 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 PTGS2P35354 604 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CASP3P42574 277 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 MAGEA5P43359 124 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 MAGEA8P43361 318 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 UQCRFS1P47985 274 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 MAN2A2P49641 1150 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ATP4BP51164 291 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 POLR2JP52435 117 aaKnown RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 HBA1P69905 142 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms