RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	CCNL2	Q96S94	520 aa	Predicted RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CHP1	Q99653	195 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	CBWD1	Q9BRT8	395 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	MMTAG2	Q9BU76	263 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	PINK1	Q9BXM7	581 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ROPN1B	Q9BZX4	212 aa	Predicted RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	WWP1	Q9H0M0	922 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	RBM38	Q9H0Z9	239 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	KLHL31	Q9H511	634 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	AAMDC	Q9H7C9	122 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	NEK6	Q9HC98	313 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	TUBG2	Q9NRH3	451 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	RNF146	Q9NTX7	359 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	KLHL28	Q9NXS3	571 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	PKD2L2	Q9NZM6	624 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	KLHL9	Q9P2J3	617 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	B3GAT1	Q9P2W7	334 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	PEF1	Q9UBV8	284 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	FBXL2	Q9UKC9	423 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	SLCO1B1	Q9Y6L6	691 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	KMT2B	Q9UMN6	2715 aa	Predicted RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ZMYM6	O95789	1325 aa		3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	ATXN2	Q99700	1313 aa	Known RBP	3.87	□□□□□ -1.79
PCM1-223	ENST00000524356	MAP1B	P46821	2468 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356		A0A1B0GUV1	79 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	HEATR9	A2RTY3	570 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	BTBD17	A6NE02	478 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	NPIPA2	E9PIF3	369 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PPIAL4D	F5H284	164 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356		M0R296	226 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	ARPC3	O15145	178 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PRKAB2	O43741	272 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	BCAS1	O75363	584 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	WISP2	O76076	250 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	CPNE6	O95741	557 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	BAG3	O95817	575 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	GNA14	O95837	355 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	GOT2	P00505	430 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	CHRNA1	P02708	482 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	ENO3	P13929	434 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNF44	P15621	663 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	ATP5C1	P36542	298 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PPT1	P50897	306 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	KCNK10	P57789	538 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PDE1B	Q01064	536 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	NCBP1	Q09161	790 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PTGR1	Q14914	329 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	P2RY14	Q15391	338 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	CAMK4	Q16566	473 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	RBBP7	Q16576	425 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	TATDN3	Q17R31	274 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	UGT3A2	Q3SY77	523 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PRAMEF5	Q5TYX0	476 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PRAMEF6	Q5VXH4	476 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	KCTD18	Q6PI47	426 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	CORO6	Q6QEF8	472 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356		Q75L30	129 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	KATNAL2	Q8IYT4	538 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	TRIML2	Q8N7C3	387 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	TRPV3	Q8NET8	790 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	SPATA4	Q8NEY3	305 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	OR10Q1	Q8NGQ4	319 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	OR52I2	Q8NH67	350 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	TSEN15	Q8WW01	171 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	DAZL	Q92904	295 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	MCUR1	Q96AQ8	359 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	KIAA1143	Q96AT1	154 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	EME1	Q96AY2	570 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	THOC1	Q96FV9	657 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	BPIFA3	Q9BQP9	254 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	ZMYND12	Q9H0C1	365 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	AUNIP	Q9H7T9	357 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	CLK4	Q9HAZ1	481 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	RAVER2	Q9HCJ3	691 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	GKN1	Q9NS71	199 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	DDX28	Q9NUL7	540 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	P2RX2	Q9UBL9	471 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	WNT16	Q9UBV4	365 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PISD	Q9UG56	409 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	ANGPTL2	Q9UKU9	493 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	FZD10	Q9ULW2	581 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	OR10H1	Q9Y4A9	318 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	SPIN1	Q9Y657	262 aa	Predicted RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PDS5A	Q29RF7	1337 aa	Known RBP	3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	PKD1L2	Q7Z442	2459 aa		3.86	□□□□□ -1.79
PCM1-223	ENST00000524356	TTC26	A0AVF1	554 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	DPPA5	A6NC42	116 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	METTL21EP	A6NDL7	271 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	PRR23A	A6NEV1	266 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	PCP4L1	A6NKN8	68 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356		A6NNC1	897 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	SUPT3H	B4E1H0	165 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	NPIPA3	F8WFD2	350 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	TMEM178B	H3BS89	294 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	ABCD4	O14678	606 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	MBTPS2	O43462	519 aa		3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	LCMT2	O60294	686 aa	Known RBP	3.85	□□□□□ -1.79
PCM1-223	ENST00000524356	DFNA5	O60443	496 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms