RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	ENPP2	Q13822	863 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	PDE7A	Q13946	482 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GAMT	Q14353	236 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	SPHAR	Q15513	63 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	HERC4	Q5GLZ8	1057 aa	Predicted RBP	3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	WLS	Q5T9L3	541 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	TMEM53	Q6P2H8	277 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	AFTPH	Q6ULP2	937 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CHMP1B	Q7LBR1	199 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	AMZ2	Q86W34	360 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	STH	Q8IWL8	128 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	LRRC34	Q8IZ02	419 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	THEM5	Q8N1Q8	247 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	RNF149	Q8NC42	400 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GTF3A	Q92664	365 aa	Known RBP	3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	HAS2	Q92819	552 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	FBXO32	Q969P5	355 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	C11orf52	Q96A22	123 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	TMEM186	Q96B77	213 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	SAMD8	Q96LT4	415 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	RPRD1A	Q96P16	312 aa	Predicted RBP	3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	PANX2	Q96RD6	677 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ZBTB18	Q99592	522 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	C9orf16	Q9BUW7	83 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	POLR1E	Q9GZS1	481 aa	Known RBP	3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	UPF3A	Q9H1J1	476 aa	Known RBP	3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	PARL	Q9H300	379 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	MTHFD2L	Q9H903	347 aa	Predicted RBP	3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	MAGEF1	Q9HAY2	307 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	SYTL2	Q9HCH5	934 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	NGB	Q9NPG2	151 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	B3GAT2	Q9NPZ5	323 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	AGPAT5	Q9NUQ2	364 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	IL37	Q9NZH6	218 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ANKMY1	Q9P2S6	941 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	HMGXB4	Q9UGU5	601 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ATP6V1H	Q9UI12	483 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	DNPEP	Q9ULA0	475 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ERVK-19	Q9WJR5	959 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	NCOA3	Q9Y6Q9	1424 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	KIDINS220	Q9ULH0	1771 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	FRMPD1	Q5SYB0	1578 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	NINL	Q9Y2I6	1382 aa		3.76	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ABCC1	P33527	1531 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	MAP3K1	Q13233	1512 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GPATCH8	Q9UKJ3	1502 aa	Known RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CAMSAP2	Q08AD1	1489 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GOLGA8O	A6NCC3	632 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	TRIM49B	A6NDI0	452 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GOLGA6L4	A6NEF3	574 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GOLGA8N	F8WBI6	632 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GOLGA8M	H3BSY2	632 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298		H7C423	109 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	NTN3	O00634	580 aa	Predicted RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	HAT1	O14929	419 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	OGT	O15294	1046 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CLDN3	O15551	220 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ZNF749	O43361	778 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	IDH3B	O43837	385 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GRAP2	O75791	330 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	SORBS2	O94875	1100 aa	Known RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ERLIN2	O94905	339 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	MFN2	O95140	757 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CPNE6	O95741	557 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CSTA	P01040	98 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	EPO	P01588	193 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	HLA-DRA	P01903	254 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	KRT8	P05787	483 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CLU	P10909	449 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	RALB	P11234	206 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	POU2F1	P14859	743 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	DPEP1	P16444	411 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	UGT1A6	P19224	532 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	AOC1	P19801	751 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	UGT1A4	P22310	534 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	HNRNPA2B1	P22626	353 aa	Known RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GLRA1	P23415	457 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GIF	P27352	417 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	PSMA5	P28066	241 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	PPP1R2	P41236	205 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CDKN1B	P46527	198 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	SLC11A1	P49279	550 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	ABCE1	P61221	599 aa	Known RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	VBP1	P61758	197 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	SPIB	Q01892	262 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	GFPT1	Q06210	699 aa	Predicted RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	OVGP1	Q12889	678 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	WDR43	Q15061	677 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	CHRNA6	Q15825	494 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	STXBP2	Q15833	593 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	C10orf120	Q5SQS8	335 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	TWF2	Q6IBS0	349 aa	Known RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	PPP1R2P3	Q6NXS1	205 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	C3P1	Q6ZMU1	363 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	MACC1	Q6ZN28	852 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	USP50	Q70EL3	339 aa	Predicted RBP	3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	KCNMB4	Q86W47	210 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	OR4N5	Q8IXE1	308 aa		3.75	□□□□□ -1.81
CTNNA1-238	ENST00000523298	SYCE1	Q8N0S2	351 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms