RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	TRMO	Q9BU70	441 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	LRTM1	Q9HBL6	345 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	C1orf109	Q9NX04	203 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	SLC17A7	Q9P2U7	560 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	LGALS13	Q9UHV8	139 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	FBXL2	Q9UKC9	423 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	CAMK2A	Q9UQM7	478 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	DNAJC15	Q9Y5T4	150 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	WIF1	Q9Y5W5	379 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	HIVEP1	P15822	2718 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	CD8B2	A6NJW9	211 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	TMEM233	B4DJY2	109 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	FADS1	O60427	444 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	SLITRK5	O94991	958 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	ACTL6A	O96019	429 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	CHRNG	P07510	517 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	FGF4	P08620	206 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	LINC00032	P0C843	101 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	CYP4B1	P13584	511 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	CPN1	P15169	458 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	CREB1	P16220	341 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	CAPN3	P20807	821 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF136	P52737	540 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	GFRA1	P56159	465 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	PSPH	P78330	225 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	GAB1	Q13480	694 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	EFR3A	Q14156	821 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	RFTN2	Q52LD8	501 aa	Predicted RBP	11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF385B	Q569K4	471 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	OR5M10	Q6IEU7	315 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	ANKRD26P1	Q6NSI1	321 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF551	Q7Z340	670 aa	Predicted RBP	11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	TRIM42	Q8IWZ5	723 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	CLYBL	Q8N0X4	340 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	GFM2	Q969S9	779 aa	Known RBP	11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF764	Q96H86	408 aa	Predicted RBP	11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	FAM111A	Q96PZ2	611 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	MECR	Q9BV79	373 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	SENP1	Q9P0U3	644 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	KCNN3	Q9UGI6	736 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	MID2	Q9UJV3	735 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	FIS1	Q9Y3D6	152 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	L3MBTL1	Q9Y468	752 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	MAP1A	P78559	2803 aa	Predicted RBP	11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	SPG11	Q96JI7	2443 aa		11.25	□□□□□ -0.61
VEGFA-223	ENST00000523125	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	MBD3L3	A6NE82	208 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	SYT5	O00445	386 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	LSM1	O15116	133 aa	Known RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	RGS14	O43566	566 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZIC3	O60481	467 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	NPHS1	O60500	1241 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	TBX19	O60806	448 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	COQ9	O75208	318 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	SPAG7	O75391	227 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	IFI6	P09912	130 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	SDC1	P18827	310 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	POU3F2	P20265	443 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	BMP5	P22003	454 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	GRK2	P25098	689 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	IL12B	P29460	328 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	NTS	P30990	170 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	SRD5A2	P31213	254 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ARRB2	P32121	409 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	MAP3K8	P41279	467 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF155	Q12901	538 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	SNTB1	Q13884	538 aa	Known RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	CYP27C1	Q4G0S4	372 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ARL13A	Q5H913	290 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ADGRE4P	Q86SQ3	457 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	OR14L1P	Q8NHC6	308 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZPLD1	Q8TCW7	415 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	TRIB1	Q96RU8	372 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	CCT7	Q99832	543 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	SH3GL2	Q99962	352 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	TUBA1C	Q9BQE3	449 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	LMF2	Q9BU23	707 aa	Known RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	G6PC3	Q9BUM1	346 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	RTN4R	Q9BZR6	473 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	CALHM2	Q9HA72	323 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	FLRT3	Q9NZU0	649 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	BAIAP2L1	Q9UHR4	511 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	OR10H1	Q9Y4A9	318 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	TRAF6	Q9Y4K3	522 aa		11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.24	□□□□□ -0.61
VEGFA-223	ENST00000523125	DVL2	O14641	736 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	AKAP10	O43572	662 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	IL33	O95760	270 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	IL2RA	P01589	272 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	NEFH	P12036	1026 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	EVI2B	P34910	448 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	KRT20	P35900	424 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	FRK	P42685	505 aa	Predicted RBP	11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	STAR	P49675	285 aa		11.23	□□□□□ -0.61

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