RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	IMP4	Q96G21	291 aa	Known RBP	6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	CDKN2AIPNL	Q96HQ2	116 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	SAMD8	Q96LT4	415 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	AGAP3	Q96P47	875 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	SMIM14	Q96QK8	99 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	MCCC1	Q96RQ3	725 aa	Predicted RBP	6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	C10orf88	Q9H8K7	445 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	FAM118A	Q9NWS6	357 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	TXNDC16	Q9P2K2	825 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	RABL2B	Q9UNT1	228 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	HS3ST3A1	Q9Y663	406 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	PCNX2	A6NKB5	2137 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	FRY	Q5TBA9	3013 aa		6.58	□□□□□ -1.36
SPIDR-215	ENST00000521798	FREM2	Q5SZK8	3169 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798		A0A0J9YYE9	177 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798		A0A0U1RQS6	177 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798		A0A1B0GTQ1	180 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	FAM149A	A5PLN7	773 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798		A8MX80	341 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798		H7C0C1	242 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	PROP1	O75360	226 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	MT-ATP6	P00846	226 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	LDLR	P01130	860 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	TRBC1	P01850	177 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ALPI	P09923	528 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ZNF883	P0CG24	379 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	AREG	P15514	252 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ARSB	P15848	533 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	NAGA	P17050	411 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	CETN2	P41208	172 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ASMT	P46597	345 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ATP5O	P48047	213 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	PFN3	P60673	137 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	SGCG	Q13326	291 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	IRF4	Q15306	451 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	TPRG1L	Q5T0D9	272 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	BTNL8	Q6UX41	500 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	MEX3B	Q6ZN04	569 aa	Known RBP	6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	DBX2	Q6ZNG2	339 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798		Q6ZSR6	202 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ARHGAP22	Q7Z5H3	698 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	PTAR1	Q7Z6K3	402 aa	Predicted RBP	6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ZNF567	Q8N184	647 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	PELI3	Q8N2H9	469 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	TRIM58	Q8NG06	486 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	SPATA22	Q8NHS9	363 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	HTR3C	Q8WXA8	447 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	PROX1	Q92786	737 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	DTD2	Q96FN9	168 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	C20orf173	Q96LM9	149 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	QRFPR	Q96P65	431 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ALS2CR12	Q96Q35	445 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	TRIB3	Q96RU7	358 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	LYSMD1	Q96S90	227 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	VAT1	Q99536	393 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	SLC25A51	Q9H1U9	297 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	DPH5	Q9H2P9	285 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	PCDH9	Q9HC56	1237 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	GDF3	Q9NR23	364 aa		6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	ARID1B	Q8NFD5	2236 aa	Predicted RBP	6.57	□□□□□ -1.36
SPIDR-215	ENST00000521798	TMEM131	Q92545	1883 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	LRRK1	Q38SD2	2015 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	TPR	P12270	2363 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	HYKK	A2RU49	373 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	FPGT	O14772	594 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	DFNA5	O60443	496 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	GPR137B	O60478	399 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	MAGEC1	O60732	1142 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	PEX11A	O75192	247 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CSRP1	P21291	193 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CA4	P22748	312 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	ACP1	P24666	158 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	PIK3R1	P27986	724 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CDKN1A	P38936	164 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	MMP15	P51511	669 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CLDN15	P56746	228 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	EIF3E	P60228	445 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	RPL26	P61254	145 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	IL9R	Q01113	521 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	PDE7A	Q13946	482 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	GPR18	Q14330	331 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	FZD2	Q14332	565 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CDKN3	Q16667	212 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	SEL1L2	Q5TEA6	688 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	LRRC66	Q68CR7	880 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	KDELC1	Q6UW63	502 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	RFLNA	Q6ZTI6	216 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	PID1	Q7Z2X4	250 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	HSD11B1L	Q7Z5J1	315 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	SPRED1	Q7Z699	444 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	TECPR1	Q7Z6L1	1165 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CDKL3	Q8IVW4	592 aa	Predicted RBP	6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	FBXW8	Q8N3Y1	598 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	BMPER	Q8N8U9	685 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	DEFB124	Q8NES8	71 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	OR14A16	Q8NHC5	309 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	FBXO30	Q8TB52	745 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	MAGEC3	Q8TD91	643 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	SAP25	Q8TEE9	199 aa		6.56	□□□□□ -1.36
SPIDR-215	ENST00000521798	CKAP2	Q8WWK9	683 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms