RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 F2RL1P55085 397 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 GPX6P59796 221 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 HNRNPKP61978 463 aaKnown RBP eCLIP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 ILF2Q12905 390 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 SLMAPQ14BN4 828 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 FASTKD3Q14CZ7 662 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TOMM20Q15388 145 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 SF3A2Q15428 464 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TYSND1Q2T9J0 566 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 COL28A1Q2UY09 1125 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 BCL7AQ4VC05 210 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 PYCR3Q53H96 274 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 HSP90AA5PQ58FG0 334 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF542PQ5EBM4 170 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 DCST1Q5T197 706 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 KCTD16Q68DU8 428 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TCEAL6Q6IPX3 200 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 KLHL35Q6PF15 583 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 DOK6Q6PKX4 331 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM220Q6QAJ8 160 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CYP20A1Q6UW02 462 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 PACS1Q6VY07 963 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF704Q6ZNC4 412 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 PQLC2Q6ZP29 291 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 C3orf62Q6ZUJ4 267 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TRMT10CQ7L0Y3 403 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 LDB1Q86U70 411 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 GPR180Q86V85 440 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 PARGQ86W56 976 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 LRRC6Q86X45 466 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 GALNT13Q8IUC8 556 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CNTN4Q8IWV2 1026 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 LMNTD2Q8IXW0 634 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 ZBED8Q8IZ13 594 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 SLC25A45Q8N413 288 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 DCLK2Q8N568 766 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 OTUD6BQ8N6M0 293 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 FBXO36Q8NEA4 188 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 SLC24A4Q8NFF2 622 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 GSDMBQ8TAX9 411 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 GDAP1Q8TB36 358 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TCEAL3Q969E4 200 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TSACCQ96A04 125 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 ORAI1Q96D31 301 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 SGF29Q96ES7 293 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 RRNAD1Q96FB5 475 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CERS2Q96G23 380 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 RSRC1Q96IZ7 334 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF514Q96K75 400 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 LINC00615Q96LM1 132 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 C9orf72Q96LT7 481 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CMTM3Q96MX0 182 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TTC25Q96NG3 672 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 OR2M4Q96R27 311 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 COPS8Q99627 209 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 NUDT16L1Q9BRJ7 211 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 GTPBP2Q9BX10 602 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 FUT8Q9BYC5 575 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 PARD6BQ9BYG5 372 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TXLNGYQ9BZA5 131 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 OR2AG1Q9H205 316 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TCEAL2Q9H3H9 227 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 ANKZF1Q9H8Y5 726 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 FGF22Q9HCT0 170 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM9BQ9NQ34 198 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 MRPL40Q9NQ50 206 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 IARS2Q9NSE4 1012 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 INTS10Q9NVR2 710 aaKnown RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 NSMCE4AQ9NXX6 385 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 MARCH4Q9P2E8 410 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 POLG2Q9UHN1 485 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CRLS1Q9UJA2 301 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 MOSPD1Q9UJG1 213 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 FAF1Q9UNN5 650 aaPredicted RBP2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CHMP2BQ9UQN3 213 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 DLGAP4Q9Y2H0 992 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 PRSS21Q9Y6M0 314 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CSNK1G3Q9Y6M4 447 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 CAPN7Q9Y6W3 813 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 KIAA1549LQ6ZVL6 1849 aa2.98□□□□□ -1.93
VPS13B-209ENST00000521559 LAMA2P24043 3122 aaKnown RBP2.97□□□□□ -1.93
VPS13B-209ENST00000521559 MYOFQ9NZM1 2061 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 TTC28Q96AY4 2481 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 TCRBV9S1A1TA0A576 114 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 MGAT4DA6NG13 374 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 FAM159BA6NKW6 160 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 GOLGA8KD6RF30 607 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 LMO7DNF2Z398 122 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 H3BMM5 538 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 GOLGA8TH3BQL2 631 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 IFNL4K9M1U5 179 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 HS3ST1O14792 307 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 SCAMP1O15126 338 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 AQP9O43315 295 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 PCDH7O60245 1069 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 OR1I1O60431 355 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 SDC3O75056 442 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 TRIM16O95361 564 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 MLYCDO95822 493 aa2.97□□□□□ -1.93
VPS13B-209ENST00000521559 C1QAP02745 245 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms