RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ASB11Q8WXH4 323 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 DCUN1D1Q96GG9 259 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 LRGUKQ96M69 825 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 VPS35Q96QK1 796 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 NR1H4Q96RI1 486 aaPredicted RBP6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 FERD3LQ96RJ6 166 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 CCT7Q99832 543 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 VCX3BQ9H321 246 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 CDCP1Q9H5V8 836 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 CXorf56Q9H5V9 222 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 PARVBQ9HBI1 364 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 DEPPQ9NTK1 212 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 SMOXQ9NWM0 555 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 SLAMF8Q9P0V8 285 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 LEF1Q9UJU2 399 aaPredicted RBP6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 USP22Q9UPT9 525 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 EIF3LQ9Y262 564 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 POLR3HQ9Y535 204 aaPredicted RBP6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 AP4S1Q9Y587 144 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 HERC2O95714 4834 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 NINQ8N4C6 2090 aa6.69□□□□□ -1.34
CTNNA1-227ENST00000521387 MAGEA13PA6NCF6 341 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 KRT87PA6NCN2 255 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 MGAT4DA6NG13 374 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 RGS14O43566 566 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TCF21O43680 179 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 AP2A2O94973 939 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 VENTXO95231 258 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 HEXBP07686 556 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 LYNP07948 512 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ENO2P09104 434 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 EPB42P16452 691 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ENDOUP21128 410 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TPP2P29144 1249 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ACVR1BP36896 505 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 GRIA3P42263 894 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC6A12P48065 614 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 GSK3BP49841 420 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 EEFSECP57772 596 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 GPR85P60893 370 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 MRPS35P82673 323 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 HMGCS1Q01581 520 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 HSPA14Q0VDF9 509 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 PRKG2Q13237 762 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 BOP1Q14137 746 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 RCAN2Q14206 197 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 GRM7Q14831 915 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 SMU1Q2TAY7 513 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 RABL3Q5HYI8 236 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 YOD1Q5VVQ6 348 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 NANOGP8Q6NSW7 305 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 METTL2BQ6P1Q9 378 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TTC23LQ6PF05 361 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC2A7Q6PXP3 512 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 FIGLAQ6QHK4 219 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 DLEU7Q6UYE1 221 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 PLEKHM3Q6ZWE6 761 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TRILQ7L0X0 811 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ABHD13Q7L211 337 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 MDGA2Q7Z553 956 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 AMIGO2Q86SJ2 522 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 GALNT4Q8N4A0 578 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 RFLNBQ8N5W9 214 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 LRTOMTQ8WZ04 291 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ELMO1Q92556 727 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 FBXL8Q96CD0 374 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 LRRC46Q96FV0 321 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 PPP3R2Q96LZ3 170 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 C10orf90Q96M02 699 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 BTBD9Q96Q07 612 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TRIM54Q9BYV2 358 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 NANOGQ9H9S0 305 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 RAD18Q9NS91 495 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 INTS7Q9NVH2 962 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TMEM45AQ9NWC5 275 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ARL15Q9NXU5 204 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ALKBH4Q9NXW9 302 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ZNF629Q9UEG4 869 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 EGFL7Q9UHF1 273 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ACSL5Q9ULC5 683 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 ZNF490Q9ULM2 529 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TESMINQ9Y4I5 508 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 WIF1Q9Y5W5 379 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 DNAH1Q9P2D7 4330 aa6.68□□□□□ -1.34
CTNNA1-227ENST00000521387 TCRBV5S2A0A599 114 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 SLC5A10A0PJK1 596 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 AQP12BA6NM10 295 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 FAM166BA8MTA8 275 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 ARHGEF33A8MVX0 844 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 FAM47E-STBD1D6RA91 191 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 KLRC4-KLRK1H3BQV0 150 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 IFRD1O00458 451 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 TXNDC9O14530 226 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 KPNA5O15131 536 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 DENRO43583 198 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 LMX1BO60663 402 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 ADAM11O75078 769 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 ULK1O75385 1050 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 SEC22BO75396 215 aa6.67□□□□□ -1.34
CTNNA1-227ENST00000521387 TIPRLO75663 272 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms