RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SCIMPQ6UWF3 145 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 PLXDC2Q6UX71 529 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 PAMR1Q6UXH9 720 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 OR4N2Q8NGD1 307 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 MBD6Q96DN6 1003 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 SFXN2Q96NB2 322 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 RBM24Q9BX46 236 aaKnown RBP17.82■□□□□ 0.44
PABPC1-215ENST00000520804 TAS2R9Q9NYW1 312 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 SENP1Q9P0U3 644 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 CLCF1Q9UBD9 225 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 AKAP6Q13023 2319 aa17.82■□□□□ 0.44
PABPC1-215ENST00000520804 HRNRQ86YZ3 2850 aaPredicted RBP17.81■□□□□ 0.44
PABPC1-215ENST00000520804 B4DXG7 233 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 PLOD2O00469 737 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 GOSR1O95249 250 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 PYGBP11216 843 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 KLK2P20151 261 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 DDCP20711 480 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 CHMP24386 653 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 GRK2P25098 689 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 CLDN18P56856 261 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 MRPS22P82650 360 aaKnown RBP17.81■□□□□ 0.44
PABPC1-215ENST00000520804 ZNF763Q0D2J5 394 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 SLC44A2Q8IWA5 706 aaPredicted RBP17.81■□□□□ 0.44
PABPC1-215ENST00000520804 IFT20Q8IY31 132 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 MZB1Q8WU39 189 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 EFHD2Q96C19 240 aaPredicted RBP17.81■□□□□ 0.44
PABPC1-215ENST00000520804 INTS12Q96CB8 462 aaKnown RBP17.81■□□□□ 0.44
PABPC1-215ENST00000520804 ALPK1Q96QP1 1244 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 BBS4Q96RK4 519 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 ACBD3Q9H3P7 528 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 MID1IP1Q9NPA3 183 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 DKKL1Q9UK85 242 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 MPDZO75970 2070 aa17.81■□□□□ 0.44
PABPC1-215ENST00000520804 MTORP42345 2549 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 MYO1GB0I1T2 1018 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 UBFD1O14562 309 aaKnown RBP17.8■□□□□ 0.44
PABPC1-215ENST00000520804 ZIC3O60481 467 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 COQ9O75208 318 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 ZNF708P17019 499 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 DPP4P27487 766 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 FOXA1P55317 472 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 PPP2R2AP63151 447 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 EEF1A1P68104 462 aaKnown RBP17.8■□□□□ 0.44
PABPC1-215ENST00000520804 PSG6Q00889 435 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 C2orf80Q0P641 193 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 GAB1Q13480 694 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 PRSS53Q2L4Q9 553 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 SPDYAQ5MJ70 313 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 EEF1A1P5Q5VTE0 462 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 CAMKMTQ7Z624 323 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 LUZP2Q86TE4 346 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 GCNT2Q8N0V5 402 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 CNPY4Q8N129 248 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 DACH2Q96NX9 599 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 PIGMQ9H3S5 423 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 GALNT8Q9NY28 637 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 PSMC3IPQ9P2W1 217 aaPredicted RBP17.8■□□□□ 0.44
PABPC1-215ENST00000520804 DCDC2Q9UHG0 476 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 EMCNQ9ULC0 261 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 RPH3AQ9Y2J0 694 aaPredicted RBP17.8■□□□□ 0.44
PABPC1-215ENST00000520804 OR10H1Q9Y4A9 318 aa17.8■□□□□ 0.44
PABPC1-215ENST00000520804 A0A087WV62 115 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 C17orf51A8MQB3 221 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 HCRTR2O43614 444 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 DIAPH2O60879 1101 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 SLITRK5O94991 958 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 RAF1P04049 648 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 EVI2BP34910 448 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 CPA2P48052 419 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 NCBP2P52298 156 aaKnown RBP eCLIP17.79■□□□□ 0.44
PABPC1-215ENST00000520804 B3GALT5-AS1P59052 145 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 ZNF155Q12901 538 aaPredicted RBP17.79■□□□□ 0.44
PABPC1-215ENST00000520804 SLC29A2Q14542 456 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 BCL2A1Q16548 175 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 GRAMD2AQ8IUY3 354 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 CCNYL1Q8N7R7 359 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 OR4K17Q8NGC6 315 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 CDC26Q8NHZ8 85 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.79■□□□□ 0.44
PABPC1-215ENST00000520804 CCDC126Q96EE4 140 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 YIPF4Q9BSR8 244 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 TXLNGYQ9BZA5 131 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 PLEKHF2Q9H8W4 249 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 GRID1Q9ULK0 1009 aa17.79■□□□□ 0.44
PABPC1-215ENST00000520804 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 A8MXE2 369 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 G3V2L1 256 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 TNFSF13O75888 250 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 ATE1O95260 518 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 TGM6O95932 706 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 JUNP05412 331 aaKnown RBP17.78■□□□□ 0.44
PABPC1-215ENST00000520804 FAM153BP0C7A2 387 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 TCEA1P23193 301 aaKnown RBP17.78■□□□□ 0.44
PABPC1-215ENST00000520804 MC3RP41968 323 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 DSCR4P56555 118 aaPredicted RBP17.78■□□□□ 0.44
PABPC1-215ENST00000520804 IMPG1Q17R60 797 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 FAM153CQ494X1 144 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 CYP27C1Q4G0S4 372 aa17.78■□□□□ 0.44
PABPC1-215ENST00000520804 FAM71E1Q6IPT2 247 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms