RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ICOSLGO75144 302 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 KCNH1O95259 989 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 IGHG3P01860 377 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 SNRPB2P08579 225 aaKnown RBP12.96□□□□□ -0.33
VEGFA-221ENST00000520265 DHRS4L1P0CG22 281 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 KITP10721 976 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 ELAVL4P26378 380 aaKnown RBP12.96□□□□□ -0.33
VEGFA-221ENST00000520265 HTR1EP28566 365 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 GABRA3P34903 492 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 RPL14P50914 215 aaKnown RBP12.96□□□□□ -0.33
VEGFA-221ENST00000520265 PSPHP78330 225 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 BST1Q10588 318 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 PMPCAQ10713 525 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 GXYLT1Q4G148 440 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-221ENST00000520265 TMEM211Q6ICI0 200 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 OR5M10Q6IEU7 315 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 XKRXQ6PP77 449 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 OR2L13Q8N349 312 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 KRTCAP2Q8N6L1 136 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 OR14L1PQ8NHC6 308 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 RMND5BQ96G75 393 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-221ENST00000520265 TMEM41AQ96HV5 264 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 MS4A4EQ96PG1 132 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 YIPF4Q9BSR8 244 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 TMBIM4Q9HC24 238 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-221ENST00000520265 NOP53Q9NZM5 478 aaKnown RBP12.96□□□□□ -0.33
VEGFA-221ENST00000520265 CBLCQ9ULV8 474 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 CAMK2AQ9UQM7 478 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 SLC6A5Q9Y345 797 aa12.96□□□□□ -0.33
VEGFA-221ENST00000520265 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.34
VEGFA-221ENST00000520265 UTP20O75691 2785 aaKnown RBP12.96□□□□□ -0.34
VEGFA-221ENST00000520265 A0A1W2PRB8 838 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 SNPHO15079 494 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 GMFGO60234 142 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
VEGFA-221ENST00000520265 G6PDP11413 515 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 CYP4B1P13584 511 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 ACVR2AP27037 513 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 DCTP40126 519 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 CLK3P49761 638 aaKnown RBP12.95□□□□□ -0.34
VEGFA-221ENST00000520265 PSMD4P55036 377 aaKnown RBP12.95□□□□□ -0.34
VEGFA-221ENST00000520265 PRR5P85299 388 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 PDE7AQ13946 482 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 VPS26BQ4G0F5 336 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 EIPR1Q53HC9 387 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 TNFAIP8L3Q5GJ75 292 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 ATG16L1Q676U5 607 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 TIGD3Q6B0B8 471 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 GALNT10Q86SR1 603 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 YRDCQ86U90 279 aaKnown RBP12.95□□□□□ -0.34
VEGFA-221ENST00000520265 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 RPRMLQ8N4K4 120 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 OR4K17Q8NGC6 315 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 OR6Y1Q8NGX8 325 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 CEP70Q8NHQ1 597 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 NEIL3Q8TAT5 605 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 PIK3R3Q92569 461 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 RND1Q92730 232 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 MTERF3Q96E29 417 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 DTNBP1Q96EV8 351 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 C20orf27Q9GZN8 174 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 ACSS1Q9NUB1 689 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-221ENST00000520265 ZCCHC3Q9NUD5 404 aaKnown RBP12.95□□□□□ -0.34
VEGFA-221ENST00000520265 PNPOQ9NVS9 261 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 QPCTLQ9NXS2 382 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 PPP4R1LQ9P1A2 415 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 WIF1Q9Y5W5 379 aa12.95□□□□□ -0.34
VEGFA-221ENST00000520265 NCKAP5O14513 1909 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 GXYLT2A0PJZ3 443 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 EMC8O43402 210 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 TSPAN2O60636 221 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 CLDN14O95500 239 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 C6orf47O95873 294 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 LAMP1P11279 417 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 PRPS1L1P21108 318 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 ENDOUP21128 410 aaKnown RBP12.94□□□□□ -0.34
VEGFA-221ENST00000520265 GRNP28799 593 aaKnown RBP12.94□□□□□ -0.34
VEGFA-221ENST00000520265 EVI2BP34910 448 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 PNLIPRP2P54317 469 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 NME5P56597 212 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 NUP107P57740 925 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 PSG6Q00889 435 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 SNTA1Q13424 505 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 GAB1Q13480 694 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 ART3Q13508 389 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 TP53BP2Q13625 1128 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 CYP27C1Q4G0S4 372 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 NXNQ6DKJ4 435 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 B3GNT6Q6ZMB0 384 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 TRIM42Q8IWZ5 723 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 COX18Q8N8Q8 333 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 FAM83FQ8NEG4 500 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-221ENST00000520265 PHF10Q8WUB8 498 aaKnown RBP12.94□□□□□ -0.34
VEGFA-221ENST00000520265 SLC35A4Q96G79 324 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 DMRTA2Q96SC8 542 aa12.94□□□□□ -0.34
VEGFA-221ENST00000520265 SORT1Q99523 831 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms