RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GRB14Q14449 540 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SIX1Q15475 284 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 INAQ16352 499 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 KNOP1Q1ED39 458 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 CCDC14Q49A88 953 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM106AQ4KMX7 169 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 C2CD6Q53TS8 623 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZRANB3Q5FWF4 1079 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM46CQ5VWP2 391 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 METTL21CQ5VZV1 264 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF772Q68DY9 489 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 OR4C11Q6IEV9 310 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SPOPLQ6IQ16 392 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 PRR5LQ6MZQ0 368 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 APOBEC3HQ6NTF7 200 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 DHRS11Q6UWP2 260 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 C3P1Q6ZMU1 363 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 COX8CQ7Z4L0 72 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 NANOGNBQ7Z5D8 188 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 NT5DC3Q86UY8 548 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF410Q86VK4 478 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKRD46Q86W74 232 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ERI1Q8IV48 349 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 CCDC65Q8IXS2 484 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 PEX5LQ8IYB4 626 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 CCDC185Q8N715 623 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 NHLRC2Q8NBF2 726 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF485Q8NCK3 441 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 MAPK1IP1LQ8NDC0 245 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 GMCL1P1Q8NEA9 526 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 PRSS33Q8NF86 280 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 GOT1L1Q8NHS2 421 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SCFD1Q8WVM8 642 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 CASP10Q92851 521 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ART4Q93070 314 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 DNAJC1Q96KC8 554 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM218AQ96MZ4 157 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 SERPINB12Q96P63 405 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 AGAP4Q96P64 663 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 PARK7Q99497 189 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 PLIN2Q99541 437 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 DOK1Q99704 481 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ERP44Q9BS26 406 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 ATG101Q9BSB4 218 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 GANQ9H2C0 597 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 AZI2Q9H6S1 392 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 KCNK13Q9HB14 408 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 GIN1Q9NXP7 522 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 TAS2R1Q9NYW7 299 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 THEGQ9P2T0 379 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 UVRAGQ9P2Y5 699 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 PCYOX1Q9UHG3 505 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 STX8Q9UNK0 236 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 STK38LQ9Y2H1 464 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 USH1CQ9Y6N9 552 aa2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 MYH9P35579 1960 aaKnown RBP2.77□□□□□ -1.97
HMGB1P41-201ENST00000520234 COL5A3P25940 1745 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 SCN7AQ01118 1682 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 A0A087X0T9 212 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 A0A1B0GU03 582 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 hCG_38984A0A1B0GV85 526 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 A0A1W2PQ67 120 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 E5RGE8 158 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 E9PQ18 207 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 H0Y626 953 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 H3BMM5 538 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 GOLGA8TH3BQL2 631 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 RNF103O00237 685 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PGRMC1O00264 195 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 KMOO15229 486 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC22A1O15245 554 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 RGS16O15492 202 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 AQP9O43315 295 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 CALUO43852 315 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 TOM1O60784 492 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 RAD51DO75771 328 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 TDP2O95551 362 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM228BP0C875 321 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZCCHC18P0CG32 403 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 GZMAP12544 262 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 UQCRBP14927 111 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 GLULP15104 373 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANPEPP15144 967 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 UCHL3P15374 230 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PIK3R1P27986 724 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 GCAP28676 217 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PDHA2P29803 388 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PRDX6P30041 224 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 CDK9P50750 372 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 VCPP55072 806 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 RPP38P78345 283 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 IFITM2Q01629 132 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 DHODHQ02127 395 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 GFPT1Q06210 699 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 KLHL30Q0D2K2 578 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 HSPA14Q0VDF9 509 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ELAVL2Q12926 359 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 CALCOCO2Q13137 446 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NFATC2Q13469 925 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms