RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ARHGAP19Q14CB8 494 aa2.59□□□□□ -2
SKP1-204ENST00000517691 PCOLCEQ15113 449 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ZIC1Q15915 447 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SLC5A12Q1EHB4 618 aa2.59□□□□□ -2
SKP1-204ENST00000517691 DEFB110Q30KQ9 67 aa2.59□□□□□ -2
SKP1-204ENST00000517691 C18orf21Q32NC0 220 aaPredicted RBP2.59□□□□□ -2
SKP1-204ENST00000517691 TBC1D25Q3MII6 688 aa2.59□□□□□ -2
SKP1-204ENST00000517691 FBXO48Q5FWF7 155 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CAPN13Q6MZZ7 669 aaPredicted RBP2.59□□□□□ -2
SKP1-204ENST00000517691 PWWP2BQ6NUJ5 590 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CYB5D1Q6P9G0 228 aa2.59□□□□□ -2
SKP1-204ENST00000517691 EMBQ6PCB8 327 aa2.59□□□□□ -2
SKP1-204ENST00000517691 PAPD4Q6PIY7 484 aaKnown RBP2.59□□□□□ -2
SKP1-204ENST00000517691 AGTRAPQ6RW13 159 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CEACAM20Q6UY09 585 aa2.59□□□□□ -2
SKP1-204ENST00000517691 WDR88Q6ZMY6 472 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CDHR3Q6ZTQ4 885 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SEM1Q6ZVN7 128 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SLC46A3Q7Z3Q1 461 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ADAMTSL2Q86TH1 951 aa2.59□□□□□ -2
SKP1-204ENST00000517691 C17orf64Q86WR6 236 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ZFAND4Q86XD8 727 aa2.59□□□□□ -2
SKP1-204ENST00000517691 KMT5CQ86Y97 462 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TICAM1Q8IUC6 712 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TMEM126BQ8IUX1 230 aa2.59□□□□□ -2
SKP1-204ENST00000517691 GPR135Q8IZ08 494 aa2.59□□□□□ -2
SKP1-204ENST00000517691 D2HGDHQ8N465 521 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SNX31Q8N9S9 440 aa2.59□□□□□ -2
SKP1-204ENST00000517691 L3MBTL4Q8NA19 623 aa2.59□□□□□ -2
SKP1-204ENST00000517691 Q8NA96 180 aa2.59□□□□□ -2
SKP1-204ENST00000517691 NUDT10Q8NFP7 164 aa2.59□□□□□ -2
SKP1-204ENST00000517691 OR2L3Q8NG85 312 aa2.59□□□□□ -2
SKP1-204ENST00000517691 OR13C2Q8NGS9 318 aa2.59□□□□□ -2
SKP1-204ENST00000517691 STAG3L4Q8TBR4 150 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SLC2A12Q8TD20 617 aa2.59□□□□□ -2
SKP1-204ENST00000517691 MZB1Q8WU39 189 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TMEM186Q96B77 213 aa2.59□□□□□ -2
SKP1-204ENST00000517691 PYCR2Q96C36 320 aa2.59□□□□□ -2
SKP1-204ENST00000517691 MTBPQ96DY7 904 aa2.59□□□□□ -2
SKP1-204ENST00000517691 MMABQ96EY8 250 aaPredicted RBP2.59□□□□□ -2
SKP1-204ENST00000517691 NUDT11Q96G61 164 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SLC41A2Q96JW4 573 aa2.59□□□□□ -2
SKP1-204ENST00000517691 C5orf34Q96MH7 638 aa2.59□□□□□ -2
SKP1-204ENST00000517691 HS6ST2Q96MM7 605 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ZNF578Q96N58 590 aaPredicted RBP2.59□□□□□ -2
SKP1-204ENST00000517691 PRAP1Q96NZ9 151 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TUBA1CQ9BQE3 449 aa2.59□□□□□ -2
SKP1-204ENST00000517691 MESP1Q9BRJ9 268 aa2.59□□□□□ -2
SKP1-204ENST00000517691 DPH7Q9BTV6 452 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SPATA5L1Q9BVQ7 753 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SGPP1Q9BX95 441 aa2.59□□□□□ -2
SKP1-204ENST00000517691 DERL2Q9GZP9 239 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SPRTNQ9H040 489 aaPredicted RBP2.59□□□□□ -2
SKP1-204ENST00000517691 NUAK2Q9H093 628 aa2.59□□□□□ -2
SKP1-204ENST00000517691 HRH4Q9H3N8 390 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CENPHQ9H3R5 247 aa2.59□□□□□ -2
SKP1-204ENST00000517691 PLK3Q9H4B4 646 aa2.59□□□□□ -2
SKP1-204ENST00000517691 ZCCHC4Q9H5U6 513 aa2.59□□□□□ -2
SKP1-204ENST00000517691 APMAPQ9HDC9 416 aa2.59□□□□□ -2
SKP1-204ENST00000517691 GCM1Q9NP62 436 aa2.59□□□□□ -2
SKP1-204ENST00000517691 FBXO8Q9NRD0 319 aa2.59□□□□□ -2
SKP1-204ENST00000517691 FGF21Q9NSA1 209 aa2.59□□□□□ -2
SKP1-204ENST00000517691 STARD5Q9NSY2 213 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TMEM140Q9NV12 185 aa2.59□□□□□ -2
SKP1-204ENST00000517691 WWOXQ9NZC7 414 aa2.59□□□□□ -2
SKP1-204ENST00000517691 FOXJ2Q9P0K8 574 aa2.59□□□□□ -2
SKP1-204ENST00000517691 STOX2Q9P2F5 926 aaPredicted RBP2.59□□□□□ -2
SKP1-204ENST00000517691 PSMC3IPQ9P2W1 217 aaPredicted RBP2.59□□□□□ -2
SKP1-204ENST00000517691 PEMTQ9UBM1 199 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TRPC4Q9UBN4 977 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CHRNA9Q9UGM1 479 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TAC3Q9UHF0 121 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SLC23A1Q9UHI7 598 aa2.59□□□□□ -2
SKP1-204ENST00000517691 TEKT2Q9UIF3 430 aa2.59□□□□□ -2
SKP1-204ENST00000517691 IKZF3Q9UKT9 509 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CNOT11Q9UKZ1 510 aaKnown RBP2.59□□□□□ -2
SKP1-204ENST00000517691 RARRES3Q9UL19 164 aa2.59□□□□□ -2
SKP1-204ENST00000517691 SNX7Q9UNH6 387 aa2.59□□□□□ -2
SKP1-204ENST00000517691 OARD1Q9Y530 152 aa2.59□□□□□ -2
SKP1-204ENST00000517691 CNOT1A5YKK6 2376 aaKnown RBP2.59□□□□□ -2
SKP1-204ENST00000517691 CACNA1AO00555 2505 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TDRD6O60522 2096 aaKnown RBP2.58□□□□□ -2
SKP1-204ENST00000517691 SPEGQ15772 3267 aa2.58□□□□□ -2
SKP1-204ENST00000517691 COL5A1P20908 1838 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 A0A0J9YVX5 310 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TEX51A0A1B0GUA7 166 aa2.58□□□□□ -2
SKP1-204ENST00000517691 A0A1B0GWJ7 208 aa2.58□□□□□ -2
SKP1-204ENST00000517691 A0A1W2PPV9 198 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TMEM8BA6NDV4 472 aa2.58□□□□□ -2
SKP1-204ENST00000517691 AQP7P3A6NL99 342 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SYCE1LA8MT33 242 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TARM1B6A8C7 271 aa2.58□□□□□ -2
SKP1-204ENST00000517691 E7EQ34 232 aa2.58□□□□□ -2
SKP1-204ENST00000517691 RGS10O43665 173 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TLX3O43711 291 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 SMIM24O75264 130 aa2.58□□□□□ -2
SKP1-204ENST00000517691 VPS4BO75351 444 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ITGA10O75578 1167 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SCRG1O75711 98 aa2.58□□□□□ -2
SKP1-204ENST00000517691 STK16O75716 305 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms