RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SNRPD1P62314 119 aaKnown RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 MAP2K1Q02750 393 aaPredicted RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BNIP1Q12981 228 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 KIAA0141Q14154 515 aaPredicted RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 UBE2V2Q15819 145 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TMEM52BQ4KMG9 183 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TMEM225Q6GV28 225 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BTNL3Q6UXE8 466 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 Q6ZPB1 254 aaPredicted RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 MOB2Q70IA6 237 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PRSS48Q7RTY5 328 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TSEN54Q7Z6J9 526 aaKnown RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ACOT1Q86TX2 421 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FAM228AQ86W67 206 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TMEM17Q86X19 198 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNRF1Q8ND25 227 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 OR52B6Q8NGF0 335 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 C11orf45Q8TAV5 145 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 M1APQ8TC57 530 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SLCO2A1Q92959 643 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TADA1Q96BN2 335 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SH3YL1Q96HL8 342 aaPredicted RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CNOT6LQ96LI5 555 aaKnown RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 AMDHD1Q96NU7 426 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNF300Q96RE9 604 aaPredicted RBP2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NPY6RQ99463 290 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 EPYCQ99645 322 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TMEM121Q9BTD3 319 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 WDR41Q9HAD4 459 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNF556Q9HAH1 456 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IL1RL2Q9HB29 575 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 POLD4Q9HCU8 107 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 UFSP2Q9NUQ7 469 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ETNK2Q9NVF9 386 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ANAPC7Q9UJX3 599 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CDH9Q9ULB4 789 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 MEMO1Q9Y316 297 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PYGO1Q9Y3Y4 419 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 WDR45Q9Y484 360 aa2.75□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IQCMA0A1B0GVH7 501 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 IGLON5A6NGN9 336 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 E9PBE3 544 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PDLIM1O00151 329 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BMPR1BO00238 502 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FOXE1O00358 373 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BTN3A3O00478 584 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FCMRO60667 390 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PDE5AO76074 875 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NXPH4O95158 308 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 OPN1LWP04000 364 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CCDC159P0C7I6 412 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PNMTP11086 282 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CDK4P11802 303 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 FOSL2P15408 326 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 GNB3P16520 340 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PRKACGP22612 351 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CALML3P27482 149 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CCR1P32246 355 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BDKRB1P46663 353 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 POU3F4P49335 361 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CEBPDP49716 269 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SEC61GP60059 68 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNF85Q03923 595 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BST1Q10588 318 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNF177Q13360 481 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PLD1Q13393 1074 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 EIF2B1Q14232 305 aaKnown RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 MXD4Q14582 209 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CD226Q15762 336 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 HLA-BQ31612 363 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SEL1L2Q5TEA6 688 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ACSM5Q6NUN0 579 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CCBE1Q6UXH8 406 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CYS1Q717R9 158 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ANKRD37Q7Z713 158 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CCDC71Q8IV32 467 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 LRRC75A-AS1Q8N1F1 130 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BBS5Q8N3I7 341 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SYT14Q8NB59 555 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 STXBP6Q8NFX7 210 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ZNF519Q8TB69 540 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 CNIH3Q8TBE1 160 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SCARB1Q8WTV0 552 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 MYLPFQ96A32 169 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 NTNG2Q96CW9 530 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PELI1Q96FA3 418 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ATXN7L3BQ96GX2 97 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 TGM7Q96PF1 710 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 USP28Q96RU2 1077 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ROPN1BQ9BZX4 212 aaPredicted RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 COMMD4Q9H0A8 199 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 YY1AP1Q9H869 796 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 B3GAT2Q9NPZ5 323 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 ESM1Q9NQ30 184 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 DDX18Q9NVP1 670 aaKnown RBP2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SMOXQ9NWM0 555 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 BARHL2Q9NY43 387 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 PIPOXQ9P0Z9 390 aa2.74□□□□□ -1.97
SCARNA15.2-201ENST00000516409 SEC14L4Q9UDX3 406 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms