RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	ATG16L2	Q8NAA4	619 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	SLC16A11	Q8NCK7	471 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	SETD9	Q8NE22	299 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	OR7G1	Q8NGA0	311 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	OR10G2	Q8NGC3	310 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	OR52R1	Q8NGF1	315 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	OR4C15	Q8NGM1	316 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	ART5	Q96L15	291 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MBOAT4	Q96T53	435 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MRPS26	Q9BYN8	205 aa	Known RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	SLC7A5P2	Q9GIP4	190 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	ARMC7	Q9H6L4	198 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	ZNF556	Q9HAH1	456 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	SMURF2	Q9HAU4	748 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	KRT84	Q9NSB2	600 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	SEMA4G	Q9NTN9	838 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	UBAP1	Q9NZ09	502 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	PRODH2	Q9UF12	536 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	ACAD8	Q9UKU7	415 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	ZNF232	Q9UNY5	417 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MYRF	Q9Y2G1	1151 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	POFUT2	Q9Y2G5	429 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	PRAMEF25	A6NGN4	478 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711		A8MU76	341 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	PATE3	B3GLJ2	98 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	KHNYN	O15037	678 aa	Known RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	SLC16A6	O15403	523 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	KIAA0513	O60268	411 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	UGT2B17	O75795	530 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	CCNB2	O95067	398 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	NKX2-2	O95096	273 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	RECK	O95980	971 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	DBI	P07108	87 aa	Known RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	GP1BA	P07359	652 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	CT62	P0C5K7	136 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	SPINK2	P20155	84 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	TNFRSF1B	P20333	461 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	SOX18	P35713	384 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	GRK6	P43250	576 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	LIMS1	P48059	325 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	PDX1	P52945	283 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	MYBPC1	Q00872	1141 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	DUSP8	Q13202	625 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	KCNAB2	Q13303	367 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	KEAP1	Q14145	624 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	SYT16	Q17RD7	645 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	MICA	Q29983	383 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	LIN52	Q52LA3	116 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	ARHGAP40	Q5TG30	622 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	MLIP	Q5VWP3	458 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	RHBDD2	Q6NTF9	364 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	TTC33	Q6PID6	262 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	FRRS1	Q6ZNA5	592 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	METTL27	Q8N6F8	245 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	OTUB1	Q96FW1	271 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	CCDC74B	Q96LY2	380 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	PRRC1	Q96M27	445 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	GFM1	Q96RP9	751 aa	Known RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	ARHGDIG	Q99819	225 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	GTPBP2	Q9BX10	602 aa	Known RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	POLR2J2	Q9GZM3	115 aa	Known RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	SAP130	Q9H0E3	1048 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	POLR2J3	Q9H1A7	115 aa	Known RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	SYNDIG1	Q9H7V2	258 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	ANKRA2	Q9H9E1	313 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	FOLH1B	Q9HBA9	442 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	LANCL2	Q9NS86	450 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	FAM118A	Q9NWS6	357 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	RARRES3	Q9UL19	164 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	TMCC3	Q9ULS5	477 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	CFL2	Q9Y281	166 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	KCNE3	Q9Y6H6	103 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	HSPE1-MOB4	S4R3N1	261 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	WDFY3	Q8IZQ1	3526 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	NIN	Q8N4C6	2090 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	IGF2R	P11717	2491 aa		11.13	□□□□□ -0.63
LMNA-224	ENST00000515711	MAST4	O15021	2626 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	SMG1	Q96Q15	3661 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	IGHV5-10-1	A0A0J9YXX1	117 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	FAAH	O00519	579 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	FLRT2	O43155	660 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	CDC123	O75794	336 aa	Predicted RBP	11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	IFNA16	P05015	189 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	H1F0	P07305	194 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	RPS4Y1	P22090	263 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	ALAS2	P22557	587 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	DAP	P51397	102 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	CHRNE	Q04844	493 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	FUT7	Q11130	342 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	PPP1R8	Q12972	351 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	EXOSC7	Q15024	291 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	ZSWIM7	Q19AV6	140 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	EXOC3L2	Q2M3D2	409 aa		11.12	□□□□□ -0.63
LMNA-224	ENST00000515711	ZIK1	Q3SY52	487 aa	Predicted RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms