RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SH3BP4Q9P0V3 963 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 Q9UFV3 132 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 CAMK2AQ9UQM7 478 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 WIF1Q9Y5W5 379 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 FREM3P0C091 2139 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 AHRRA9YTQ3 701 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 CTIFO43310 598 aaKnown RBP22.33■■□□□ 1.17
SNF8-213ENST00000514929 ADH7P40394 386 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 ASMTP46597 345 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 RIPPLY2Q5TAB7 128 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 VASNQ6EMK4 673 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 PLCZ1Q86YW0 608 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 WDSUB1Q8N9V3 476 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 ZFP28Q8NHY6 868 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 PPP1R14CQ8TAE6 165 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 CIDECQ96AQ7 238 aaPredicted RBP22.33■■□□□ 1.17
SNF8-213ENST00000514929 PPP3R2Q96LZ3 170 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 UGT2B28Q9BY64 529 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 TRIM8Q9BZR9 551 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 RAB21Q9UL25 225 aa22.33■■□□□ 1.17
SNF8-213ENST00000514929 TMEM114B3SHH9 223 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 TBX19O60806 448 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 TOXO94900 526 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 PSMG1O95456 288 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 IFI6P09912 130 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 BCKDHAP12694 445 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 BMP7P18075 431 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 MAPK1P28482 360 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 ETV4P43268 484 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 SF3B4Q15427 424 aaKnown RBP eCLIP22.32■■□□□ 1.161e-7■■■■■ 28.4
SNF8-213ENST00000514929 CYP27C1Q4G0S4 372 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 ZNF385BQ569K4 471 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 NHSL2Q5HYW2 709 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 WDR53Q7Z5U6 358 aaPredicted RBP22.32■■□□□ 1.16
SNF8-213ENST00000514929 NUDCD3Q8IVD9 361 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 OR14L1PQ8NHC6 308 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 ABTB1Q969K4 478 aaPredicted RBP22.32■■□□□ 1.16
SNF8-213ENST00000514929 ZBED6CLQ96FA7 236 aaPredicted RBP22.32■■□□□ 1.16
SNF8-213ENST00000514929 PRDM14Q9GZV8 571 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 CENPHQ9H3R5 247 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 Q9N2J8 555 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 ZDHHC2Q9UIJ5 367 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 CBLCQ9ULV8 474 aa22.32■■□□□ 1.16
SNF8-213ENST00000514929 PKDREJQ9NTG1 2253 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 PEX11AO75192 247 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 CYP4B1P13584 511 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 ARRB2P32121 409 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 MANFP55145 182 aaKnown RBP22.31■■□□□ 1.16
SNF8-213ENST00000514929 GAB1Q13480 694 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 DECR1Q16698 335 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 ACSF3Q4G176 576 aaPredicted RBP22.31■■□□□ 1.16
SNF8-213ENST00000514929 ATP6AP1LQ52LC2 224 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 MTERF3Q96E29 417 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 DTNBP1Q96EV8 351 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 PKNOX2Q96KN3 472 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 GIMAP2Q9UG22 337 aa22.31■■□□□ 1.16
SNF8-213ENST00000514929 MRTO4Q9UKD2 239 aaKnown RBP22.31■■□□□ 1.16
SNF8-213ENST00000514929 ADGRG4Q8IZF6 3080 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 WDR91A4D1P6 747 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 SKAP2O75563 359 aaPredicted RBP22.3■■□□□ 1.16
SNF8-213ENST00000514929 EPPINO95925 133 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 ACTL6AO96019 429 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 TUBBP07437 444 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 PRPS2P11908 318 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 DDX5P17844 614 aaKnown RBP22.3■■□□□ 1.16
SNF8-213ENST00000514929 GRK2P25098 689 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 HPCAL1P37235 193 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 SERPINB4P48594 390 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 TFF3Q07654 80 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 PDE7AQ13946 482 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 XKR7Q5GH72 579 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 DCST1Q5T197 706 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 OR5M10Q6IEU7 315 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 SZRD1Q7Z422 152 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 R3HCC1LQ7Z5L2 792 aaKnown RBP22.3■■□□□ 1.16
SNF8-213ENST00000514929 ZNF295-AS1Q8N0V1 137 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 OR6Y1Q8NGX8 325 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 LMF2Q9BU23 707 aaKnown RBP22.3■■□□□ 1.16
SNF8-213ENST00000514929 OR2B2Q9GZK3 357 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 C3orf14Q9HBI5 128 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 EQTNQ9NQ60 294 aa22.3■■□□□ 1.16
SNF8-213ENST00000514929 NPDC1Q9NQX5 325 aaPredicted RBP22.3■■□□□ 1.16
SNF8-213ENST00000514929 LRBAP50851 2863 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 TTC36A6NLP5 189 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 HSPB2A8KAH6 182 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 SCO2O43819 266 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 HSPA4LO95757 839 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 MSX1P28360 303 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 SSTR2P30874 369 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 EVI2BP34910 448 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 RFX3P48380 749 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 PRKAG1P54619 331 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 HSPB2Q16082 182 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 CEP85LQ5SZL2 805 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 LRIG3Q6UXM1 1119 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 EXOC3L1Q86VI1 746 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 LACC1Q8IV20 430 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 LIX1LQ8IVB5 337 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 ACBD4Q8NC06 268 aa22.29■■□□□ 1.16
SNF8-213ENST00000514929 RNF138Q8WVD3 245 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms