RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 VSX2P58304 361 aaPredicted RBP13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 LGALS3BPQ08380 585 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 PUM1Q14671 1186 aaKnown RBP eCLIP13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 NDUFAF5Q5TEU4 345 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 ZNF613Q6PF04 617 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 OR8K5Q8NH50 307 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 BBS10Q8TAM1 723 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 ZCCHC10Q8TBK6 192 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 DPH7Q9BTV6 452 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 GSDMCQ9BYG8 508 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 CUEDC1Q9NWM3 386 aaPredicted RBP13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 RPS6KB2Q9UBS0 482 aa13.08□□□□□ -0.31
TSPAN17-208ENST00000514705 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 NUPL2O15504 423 aaKnown RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 C1QBP02746 253 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CA3P07451 260 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 F8A1P23610 371 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 LCN1P31025 176 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 EVI2BP34910 448 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 STAT5AP42229 794 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CAP1Q01518 475 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CLPPQ16740 277 aaPredicted RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 SLC25A25Q6KCM7 469 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 GJD3Q8N144 294 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 FTMTQ8N4E7 242 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 RPLP0P6Q8NHW5 317 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 GRHL3Q8TE85 626 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 SUSD6Q92537 303 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 MAP6Q96JE9 813 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 GTPBP2Q9BX10 602 aaKnown RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 SPNS1Q9H2V7 528 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 TEX10Q9NXF1 929 aaPredicted RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 PAHP00439 452 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 MPIP34949 423 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 ZNF805Q5CZA5 627 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 WASH2PQ6VEQ5 465 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 HDDC2Q7Z4H3 204 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CYB561A3Q8NBI2 242 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 OR56A3Q8NH54 315 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 TRMT10AQ8TBZ6 339 aaKnown RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 OR8D1Q8WZ84 308 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CLIP3Q96DZ5 547 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 NXF2Q9GZY0 626 aaKnown RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 OR51J1Q9H342 316 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 HCN3Q9P1Z3 774 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 KIAA0355O15063 1070 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 SCO2O43819 266 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 H2AFB2P0C5Z0 115 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CTSAP10619 480 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 KCNJ5P48544 419 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 SRP9P49458 86 aaKnown RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CAMK2BQ13554 666 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 RAB33AQ14088 237 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 ELOAQ14241 798 aaKnown RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 TMEM44Q2T9K0 475 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 ESCO2Q56NI9 601 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 FAM209AQ5JX71 171 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 RNF44Q7L0R7 432 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CEP76Q8TAP6 659 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CHAC2Q8WUX2 184 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 SDHCQ99643 169 aaPredicted RBP13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 MED20Q9H944 212 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 NANSQ9NR45 359 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 MARK1Q9P0L2 795 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 ZNF69Q9UC07 566 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 UBQLN2Q9UHD9 624 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 CACNG2Q9Y698 323 aa13.08□□□□□ -0.32
TSPAN17-208ENST00000514705 UBE2QL1A1L167 161 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 VNN2O95498 520 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 IGHA2P01877 340 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 HOXC8P31273 242 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 PITPNBP48739 271 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 AKR1D1P51857 326 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 MAZP56270 477 aaKnown RBP13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 SNTA1Q13424 505 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 SMUG1Q53HV7 270 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 C3orf38Q5JPI3 329 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 PDXPQ96GD0 296 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 CD180Q99467 661 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 MAB21L2Q9Y586 359 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 PCDHGB7Q9Y5F8 929 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 PDCD11Q14690 1871 aaKnown RBP13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 A0A0G2JMZ2 1700 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 LRRC37A2A6NM11 1700 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 LATO43561 262 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 GCM2O75603 506 aaPredicted RBP13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 RGS9O75916 674 aaPredicted RBP13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 ADH1CP00326 375 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 ACVR2AP27037 513 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 SHC1P29353 583 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 TEKQ02763 1124 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 DCUN1D3Q8IWE4 304 aa13.07□□□□□ -0.32
TSPAN17-208ENST00000514705 IRF7Q92985 503 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms