RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 BRCC3P46736 316 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 RIDAP52758 137 aaKnown RBP6.01□□□□□ -1.45
NUP54-215ENST00000514313 HILS1P60008 231 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 UBE2HP62256 183 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 GSTO1P78417 241 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 IL9RQ01113 521 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 ZNF33BQ06732 778 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 PJVKQ0ZLH3 352 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 CEP55Q53EZ4 464 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 LINC00242Q5T6M2 205 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 BLOC1S2Q6QNY1 142 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 RNF130Q86XS8 419 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 STEAP2Q8NFT2 490 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 NANPQ8TBE9 248 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 RAET1EQ8TD07 263 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 LRRC15Q8TF66 581 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 SHC3Q92529 594 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 N4BP2L2Q92802 583 aaPredicted RBP6.01□□□□□ -1.45
NUP54-215ENST00000514313 TAF15Q92804 592 aaKnown RBP eCLIP6.01□□□□□ -1.45
NUP54-215ENST00000514313 NTNG2Q96CW9 530 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 AKR1E2Q96JD6 320 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 POM121L2Q96KW2 1035 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 SLC25A51Q9H1U9 297 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 RNF41Q9H4P4 317 aaPredicted RBP6.01□□□□□ -1.45
NUP54-215ENST00000514313 POLD4Q9HCU8 107 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 CPQQ9Y646 472 aa6.01□□□□□ -1.45
NUP54-215ENST00000514313 ZSCAN5CA6NGD5 496 aaPredicted RBP6□□□□□ -1.45
NUP54-215ENST00000514313 ARHGEF9O43307 516 aa6□□□□□ -1.45
NUP54-215ENST00000514313 IGKV3-20P01619 116 aa6□□□□□ -1.45
NUP54-215ENST00000514313 MT-ND1P03886 318 aa6□□□□□ -1.45
NUP54-215ENST00000514313 PTGER3P43115 390 aa6□□□□□ -1.45
NUP54-215ENST00000514313 OSTNP61366 133 aa6□□□□□ -1.45
NUP54-215ENST00000514313 SELPLGQ14242 412 aa6□□□□□ -1.45
NUP54-215ENST00000514313 CHI3L2Q15782 390 aa6□□□□□ -1.45
NUP54-215ENST00000514313 UBE2V2Q15819 145 aa6□□□□□ -1.45
NUP54-215ENST00000514313 MAPK6Q16659 721 aa6□□□□□ -1.45
NUP54-215ENST00000514313 C2CD6Q53TS8 623 aa6□□□□□ -1.45
NUP54-215ENST00000514313 FAM219BQ5XKK7 198 aa6□□□□□ -1.45
NUP54-215ENST00000514313 BTNL3Q6UXE8 466 aa6□□□□□ -1.45
NUP54-215ENST00000514313 STOX1Q6ZVD7 989 aa6□□□□□ -1.45
NUP54-215ENST00000514313 MIPOL1Q8TD10 442 aa6□□□□□ -1.45
NUP54-215ENST00000514313 C11orf24Q96F05 449 aaPredicted RBP6□□□□□ -1.45
NUP54-215ENST00000514313 SLC45A3Q96JT2 553 aa6□□□□□ -1.45
NUP54-215ENST00000514313 SYT11Q9BT88 431 aa6□□□□□ -1.45
NUP54-215ENST00000514313 RHOJQ9H4E5 214 aa6□□□□□ -1.45
NUP54-215ENST00000514313 UTP6Q9NYH9 597 aaKnown RBP6□□□□□ -1.45
NUP54-215ENST00000514313 MRPS33Q9Y291 106 aaKnown RBP6□□□□□ -1.45
NUP54-215ENST00000514313 OR10H1Q9Y4A9 318 aa6□□□□□ -1.45
NUP54-215ENST00000514313 MAB21L2Q9Y586 359 aa6□□□□□ -1.45
NUP54-215ENST00000514313 DDX49Q9Y6V7 483 aaKnown RBP6□□□□□ -1.45
NUP54-215ENST00000514313 CARMIL1Q5VZK9 1371 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 PPIAL4CA0A0B4J2A2 164 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 ESYT2A0FGR8 921 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 LINC01565O15544 149 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 ZSCAN12O43309 604 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 OR1F1O43749 312 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 BCAS1O75363 584 aaPredicted RBP5.99□□□□□ -1.45
NUP54-215ENST00000514313 POP4O95707 220 aaKnown RBP5.99□□□□□ -1.45
NUP54-215ENST00000514313 PPIAL4GP0DN37 164 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 HSD17B1P14061 328 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 CPN1P15169 458 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 PPP2R1BP30154 601 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 CHI3L1P36222 383 aaPredicted RBP5.99□□□□□ -1.45
NUP54-215ENST00000514313 GSK3BP49841 420 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 STK19P49842 368 aaPredicted RBP5.99□□□□□ -1.45
NUP54-215ENST00000514313 MFAP2P55001 183 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 CBX1P83916 185 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 RAB35Q15286 201 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 PCK2Q16822 640 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 SLX4IPQ5VYV7 408 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 PYHIN1Q6K0P9 492 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 SENP8Q96LD8 212 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 ZNF597Q96LX8 424 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 TTYH2Q9BSA4 534 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 MLXQ9UH92 298 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 RRP15Q9Y3B9 282 aaKnown RBP5.99□□□□□ -1.45
NUP54-215ENST00000514313 IKBKGQ9Y6K9 419 aa5.99□□□□□ -1.45
NUP54-215ENST00000514313 TM9SF1O15321 606 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 RHOBTB1O94844 696 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 SEMA4FO95754 770 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 NUDT14O95848 222 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 WNT2P09544 360 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 TRIM49P0CI25 452 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 TRIM49CP0CI26 452 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 UQCRC2P22695 453 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 PSMA2P25787 234 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 LMO2P25791 158 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 SPRP35270 261 aaPredicted RBP5.98□□□□□ -1.45
NUP54-215ENST00000514313 CAPGP40121 348 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 HMGN5P82970 282 aaKnown RBP5.98□□□□□ -1.45
NUP54-215ENST00000514313 SPATA46Q5T0L3 261 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 TTC23Q5W5X9 447 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 CATSPER3Q86XQ3 398 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 FLVCR1-AS1Q8TAF5 88 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 SPRYD4Q8WW59 207 aaPredicted RBP5.98□□□□□ -1.45
NUP54-215ENST00000514313 TADA1Q96BN2 335 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 DNAJA3Q96EY1 480 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 PUS3Q9BZE2 481 aaKnown RBP5.98□□□□□ -1.45
NUP54-215ENST00000514313 ZDHHC18Q9NUE0 388 aa5.98□□□□□ -1.45
NUP54-215ENST00000514313 TCF20Q9UGU0 1960 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms