RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MISPQ8IVT2 679 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 ZBED8Q8IZ13 594 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CENPSQ8N2Z9 138 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 TEX9Q8N6V9 391 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 OR6T1Q8NGN1 323 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 ZNF671Q8TAW3 534 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CRYGNQ8WXF5 182 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 DTNBP1Q96EV8 351 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 C11orf24Q96F05 449 aaPredicted RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 FAM173AQ9BQD7 235 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 WRAP53Q9BUR4 548 aaKnown RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 ERVK-6Q9BXR3 956 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 MRPL13Q9BYD1 178 aaKnown RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 SP140LQ9H930 580 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 GPN2Q9H9Y4 310 aaPredicted RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 TRPV5Q9NQA5 729 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 SLC35D1Q9NTN3 355 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 AGPAT5Q9NUQ2 364 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 DCAF13Q9NV06 445 aaKnown RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 ARMCX1Q9P291 453 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CGNQ9P2M7 1197 aaKnown RBP2.47□□□□□ -2.01
CHD1-207ENST00000511628 CHRNA9Q9UGM1 479 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 SH3BGRL2Q9UJC5 107 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 ATP6V0A2Q9Y487 856 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 MFHAS1Q9Y4C4 1052 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 AP1M2Q9Y6Q5 423 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 U3KQV3 271 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 CROCCQ5TZA2 2017 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 METP08581 1390 aa2.47□□□□□ -2.01
CHD1-207ENST00000511628 TTC26A0AVF1 554 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 MFSD2BA6NFX1 497 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 ZSCAN5CA6NGD5 496 aaPredicted RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 LRRC30A6NM36 301 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 SAP18O00422 153 aaKnown RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 E2F3O00716 465 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 PHOX2AO14813 284 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 ZNF253O75346 499 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 OR4F21O95013 312 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 MT-ND1P03886 318 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 GSTA1P08263 222 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 FOLR2P14207 255 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 DLSTP36957 453 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 BRCC3P46736 316 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 SLC7A2P52569 658 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 NOP14P78316 857 aaKnown RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 ELP6Q0PNE2 266 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 LTB4RQ15722 352 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 USH1GQ495M9 461 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 MS4A13Q5J8X5 152 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 ZNF506Q5JVG8 444 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 BEND6Q5SZJ8 279 aaPredicted RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 REP15Q6BDI9 236 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 ASPHD2Q6ICH7 369 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 PRR5LQ6MZQ0 368 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 AFTPHQ6ULP2 937 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 CCBE1Q6UXH8 406 aaPredicted RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 Q7L0L9 218 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 ARMCX2Q7L311 632 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 LPCAT2Q7L5N7 544 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 NET1Q7Z628 596 aaPredicted RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 MARCH9Q86YJ5 346 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 EFCAB13Q8IY85 973 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 GCNT2Q8N0V5 402 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 CSNK1G2-AS1Q8NCQ2 148 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 ART4Q93070 314 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 DNAJA3Q96EY1 480 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 PIWIL1Q96J94 861 aaKnown RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 RANBP9Q96S59 729 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 TSPAN18Q96SJ8 248 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 C19orf43Q9BQ61 176 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 THUMPD2Q9BTF0 503 aaKnown RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 RPAP3Q9H6T3 665 aaPredicted RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 ELL3Q9HB65 397 aaPredicted RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 MEPEQ9NQ76 525 aaPredicted RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 RBM28Q9NW13 759 aaKnown RBP2.46□□□□□ -2.02
CHD1-207ENST00000511628 C1orf123Q9NWV4 160 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 RDH8Q9NYR8 311 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 DHRS4-AS1Q9P1J3 65 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 EPS15L1Q9UBC2 864 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 GHRLQ9UBU3 117 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 B9D1Q9UPM9 204 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 RNF24Q9Y225 148 aa2.46□□□□□ -2.02
CHD1-207ENST00000511628 ZNF646O15015 1829 aaPredicted RBP2.45□□□□□ -2.02
CHD1-207ENST00000511628 NPIPA5A0A0B4J1W7 369 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 CCT8L1PA6NM43 557 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 NPIPA5E9PKD4 350 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 CLDN3O15551 220 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 LRRTM2O43300 516 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 TYROBPO43914 113 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 EFNA2O43921 213 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 PEX11AO75192 247 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 SLC35G4P0C7Q5 338 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 GSTT2P0CG29 244 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 GSTT2BP0CG30 244 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 HSD17B1P14061 328 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 IDSP22304 550 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 PAX7P23759 505 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 DPP4P27487 766 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 PPP2R1BP30154 601 aa2.45□□□□□ -2.02
CHD1-207ENST00000511628 OVGP1Q12889 678 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms