RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 PRR33A8MZF0 331 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 UMAD1C9J7I0 102 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 BRINP1O60477 761 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 CLN5O75503 358 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 AK1P00568 194 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 HLA-AP01891 365 aaKnown RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 LPLP06858 475 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 CD3GP09693 182 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 DDCP20711 480 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 CBLP22681 906 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 ELK4P28324 431 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 MSX1P28360 303 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 NAA10P41227 235 aaPredicted RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 MTNR1AP48039 350 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 POU3F4P49335 361 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 KRTDAPP60985 99 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 SPCS3P61009 180 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 MXD1Q05195 221 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 ZNF154Q13106 437 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 NFATC2Q13469 925 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 POU4F3Q15319 338 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 SPHARQ15513 63 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 ZNF239Q16600 458 aaKnown RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 AANATQ16613 207 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 PCGF3Q3KNV8 242 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 SBK1Q52WX2 424 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 HENMT1Q5T8I9 393 aaKnown RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 ZNF585AQ6P3V2 769 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 FUT10Q6P4F1 479 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 C17orf107Q6ZR85 190 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 DPP9Q86TI2 863 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 PRSS58Q8IYP2 241 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 LGI4Q8N135 537 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 GABRG1Q8N1C3 465 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 TMEM151AQ8N4L1 468 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 YIPF7Q8N8F6 280 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 ZSCAN4Q8NAM6 433 aaPredicted RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 ZFP62Q8NB50 900 aaPredicted RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 OR5A2Q8NGI9 324 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 OR13G1Q8NGZ3 307 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 FIBINQ8TAL6 211 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 BBS10Q8TAM1 723 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 GRHL3Q8TE85 626 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 METTL21AQ8WXB1 218 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 FAM3CQ92520 227 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 EAF2Q96CJ1 260 aaPredicted RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 CXorf40BQ96DE9 158 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 PHF21BQ96EK2 531 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 LENG8Q96PV6 779 aaPredicted RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 MGLLQ99685 303 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 FAAP24Q9BTP7 215 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 TARS2Q9BW92 718 aaKnown RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 SLC2A11Q9BYW1 496 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 UBQLN4Q9NRR5 601 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 ABCB8Q9NUT2 735 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 BABAM2Q9NXR7 383 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 TAS2R16Q9NYV7 291 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 POLLQ9UGP5 575 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 STEAP1Q9UHE8 339 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 CLEC4EQ9ULY5 219 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 LSM5Q9Y4Y9 91 aaKnown RBP3.41□□□□□ -1.86
USP53-205ENST00000509769 MRC1P22897 1456 aa3.41□□□□□ -1.86
USP53-205ENST00000509769 A0A087X0M5 115 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 A0A1B0GX30 115 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 A0A1W2PP18 115 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 WDR27A2RRH5 827 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 SIGLEC16A6NMB1 481 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 E7EQ34 232 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 TERTO14746 1132 aaKnown RBP3.4□□□□□ -1.86
USP53-205ENST00000509769 EEF1E1O43324 174 aaKnown RBP3.4□□□□□ -1.86
USP53-205ENST00000509769 ZNF780AO75290 641 aaPredicted RBP3.4□□□□□ -1.86
USP53-205ENST00000509769 LEFTY1O75610 366 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 ADH1BP00325 375 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 GBAP04062 536 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 C8GP07360 202 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 EN2P19622 333 aaPredicted RBP3.4□□□□□ -1.86
USP53-205ENST00000509769 TBPP20226 339 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 NTF3P20783 257 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 MAGP20916 626 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 PRSS3P35030 304 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 PCGF2P35227 344 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 OPRL1P41146 370 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 GP2P55259 537 aaKnown RBP3.4□□□□□ -1.86
USP53-205ENST00000509769 MLF1P58340 268 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 RPL38P63173 70 aaKnown RBP3.4□□□□□ -1.86
USP53-205ENST00000509769 KLRC3Q07444 240 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 ZNF155Q12901 538 aaPredicted RBP3.4□□□□□ -1.86
USP53-205ENST00000509769 RAB33AQ14088 237 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 GRIK5Q16478 980 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 ATP6V1FQ16864 119 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 CLEC12BQ2HXU8 276 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 DHRS11Q6UWP2 260 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 BTNL3Q6UXE8 466 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 ZNF836Q6ZNA1 936 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 CYS1Q717R9 158 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 ZNF546Q86UE3 836 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 UNC93AQ86WB7 457 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 ZBTB2Q8N680 514 aa3.4□□□□□ -1.86
USP53-205ENST00000509769 UBALD1Q8TB05 177 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms