RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GSTM5P46439 218 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 NCBP2P52298 156 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPM3-219ENST00000509409 PNLIPRP2P54317 469 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 PPP2R2AP63151 447 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 PSPHP78330 225 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 FOXF2Q12947 444 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 CFAP157Q5JU67 520 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 PLXDC2Q6UX71 529 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 NPSR1Q6W5P4 371 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 P4HA3Q7Z4N8 544 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 OR7G2Q8NG99 324 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 OR4N2Q8NGD1 307 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 KIF18AQ8NI77 898 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 WNT2BQ93097 391 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 CCDC126Q96EE4 140 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 VSTM2LQ96N03 204 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 RHOXF2Q9BQY4 288 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 SFXN3Q9BWM7 321 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
TPM3-219ENST00000509409 GSTO2Q9H4Y5 243 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 MIEF1Q9NQG6 463 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 MED13LQ71F56 2210 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 SERTM1A2A2V5 107 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 KIF2AO00139 706 aaPredicted RBP13.96□□□□□ -0.17
TPM3-219ENST00000509409 PLOD2O00469 737 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 SCO2O43819 266 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 JUNP05412 331 aaKnown RBP13.96□□□□□ -0.17
TPM3-219ENST00000509409 FAM153BP0C7A2 387 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 DDCP20711 480 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 LHX2P50458 406 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 DIO3P55073 304 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 FOXA1P55317 472 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 GFRA1P56159 465 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 ZNF763Q0D2J5 394 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 FAM153CQ494X1 144 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 GALNT18Q6P9A2 607 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 GRAMD2AQ8IUY3 354 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 ZFP3Q96NJ6 502 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 SHCBP1LQ9BZQ2 653 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 ACBD3Q9H3P7 528 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 DSN1Q9H410 356 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 SDHAF3Q9NRP4 125 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 JKAMPQ9P055 326 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 PPP4R1LQ9P1A2 415 aa13.96□□□□□ -0.17
TPM3-219ENST00000509409 MRPS18CQ9Y3D5 142 aaKnown RBP13.96□□□□□ -0.17
TPM3-219ENST00000509409 C2CD3Q4AC94 2353 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 ARHGAP21Q5T5U3 1957 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 A0A1W2PPM1 405 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 MYO1GB0I1T2 1018 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 UBFD1O14562 309 aaKnown RBP13.95□□□□□ -0.18
TPM3-219ENST00000509409 CASKO14936 926 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 ZIC3O60481 467 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 CHMP24386 653 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 NTSP30990 170 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 CLK3P49761 638 aaKnown RBP13.95□□□□□ -0.18
TPM3-219ENST00000509409 DSCR4P56555 118 aaPredicted RBP13.95□□□□□ -0.18
TPM3-219ENST00000509409 EEF1A1P68104 462 aaKnown RBP13.95□□□□□ -0.18
TPM3-219ENST00000509409 SORDQ00796 357 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 GAB1Q13480 694 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 EEF1A1P5Q5VTE0 462 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 TMEM107Q6UX40 140 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 TGIF2LYQ8IUE0 185 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 GCNT2Q8N0V5 402 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 CNPY4Q8N129 248 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 CCDC63Q8NA47 563 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 UCN2Q96RP3 112 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 TMUB1Q9BVT8 246 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 CXXC4Q9H2H0 198 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 PIGMQ9H3S5 423 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 SIRT5Q9NXA8 310 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 GRID1Q9ULK0 1009 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 POLR3HQ9Y535 204 aaPredicted RBP13.95□□□□□ -0.18
TPM3-219ENST00000509409 ZFHX3Q15911 3703 aa13.95□□□□□ -0.18
TPM3-219ENST00000509409 PRRC2AP48634 2157 aaKnown RBP13.95□□□□□ -0.18
TPM3-219ENST00000509409 A0A087WV62 115 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 G3V2L1 256 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 GLRA3O75311 464 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 PEPDP12955 493 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 HK1P19367 917 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 EVI2BP34910 448 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 MC3RP41968 323 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 RFX3P48380 749 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 CCT5P48643 541 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 GAS1P54826 345 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 NAA20P61599 178 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 STX5Q13190 355 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 KEAP1Q14145 624 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 ZNHIT3Q15649 155 aaPredicted RBP13.94□□□□□ -0.18
TPM3-219ENST00000509409 DECR1Q16698 335 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 PRSS53Q2L4Q9 553 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 CYP27C1Q4G0S4 372 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 FAM71E1Q6IPT2 247 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 ZYG11AQ6WRX3 759 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 CAMKMTQ7Z624 323 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 ADGRE4PQ86SQ3 457 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 UBQLNLQ8IYU4 475 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 C11orf24Q96F05 449 aaPredicted RBP13.94□□□□□ -0.18
TPM3-219ENST00000509409 GLIPR2Q9H4G4 154 aa13.94□□□□□ -0.18
TPM3-219ENST00000509409 RRAGDQ9NQL2 400 aaPredicted RBP13.94□□□□□ -0.18
TPM3-219ENST00000509409 DDX18Q9NVP1 670 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms