RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 FLYWCH1Q4VC44 716 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 CDKL4Q5MAI5 379 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 HIST2H2AA3Q6FI13 130 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 GTF2H2CQ6P1K8 395 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 MED27Q6P2C8 311 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 PAPD4Q6PIY7 484 aaKnown RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 IGFL3Q6UXB1 125 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 C16orf47Q6ZP98 133 aaPredicted RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 TRMT10CQ7L0Y3 403 aaKnown RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 GOLGA7Q7Z5G4 137 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 WDR53Q7Z5U6 358 aaPredicted RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 OR4N5Q8IXE1 308 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 NANOGP1Q8N7R0 232 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 PTGR2Q8N8N7 351 aaPredicted RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 FAM47BQ8NA70 645 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 PLPP5Q8NEB5 264 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 OR7G3Q8NG95 312 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 HUS1BQ8NHY5 278 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 UCN3Q969E3 161 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 PNPLA2Q96AD5 504 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 MIB2Q96AX9 1013 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 WDR34Q96EX3 536 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 VPS50Q96JG6 964 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 MTERF1Q99551 399 aaKnown RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 NPAS2Q99743 824 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 MAPKAP1Q9BPZ7 522 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 ELAC2Q9BQ52 826 aaKnown RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 CAPS2Q9BXY5 557 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 FUT8Q9BYC5 575 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 TXLNGYQ9BZA5 131 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 FAM129AQ9BZQ8 928 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 TSPYL1Q9H0U9 437 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 CDCP1Q9H5V8 836 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 NT5DC2Q9H857 520 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 NOL11Q9H8H0 719 aaKnown RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 LIN28AQ9H9Z2 209 aaKnown RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 KCNK13Q9HB14 408 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 PNO1Q9NRX1 252 aaKnown RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 C14orf105Q9NVL8 296 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 ANKRD10Q9NXR5 420 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 NUDT4Q9NZJ9 180 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 C5AR2Q9P296 337 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.22□□□□□ -1.73
NUP54-206ENST00000508465 SLC45A2Q9UMX9 530 aa4.22□□□□□ -1.73
NUP54-206ENST00000508465 V9GYY5 206 aaPredicted RBP4.22□□□□□ -1.73
NUP54-206ENST00000508465 DOCK10Q96BY6 2186 aa4.21□□□□□ -1.73
NUP54-206ENST00000508465 MYO18BQ8IUG5 2567 aa4.21□□□□□ -1.73
NUP54-206ENST00000508465 ASH1LQ9NR48 2969 aaKnown RBP4.21□□□□□ -1.74
NUP54-206ENST00000508465 CNTRLQ7Z7A1 2325 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 CELSR2Q9HCU4 2923 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 URADA6NGE7 173 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 GLOD5A6NK44 160 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SYCE1LA8MT33 242 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 TCP11X1B4DZS4 312 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 E2F3O00716 465 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 PGRMC2O15173 223 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 ZNHIT1O43257 154 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SMIM24O75264 130 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 VPS4BO75351 444 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 EEDO75530 441 aaKnown RBP4.21□□□□□ -1.74
NUP54-206ENST00000508465 PRKRAO75569 313 aaKnown RBP4.21□□□□□ -1.74
NUP54-206ENST00000508465 KRT38O76015 456 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 MYO1DO94832 1006 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SORBS2O94875 1100 aaKnown RBP4.21□□□□□ -1.74
NUP54-206ENST00000508465 ETHE1O95571 254 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 IFNA16P05015 189 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 RBP1P09455 135 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 ICAM2P13598 275 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 TNNI3P19429 210 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 MAGEA12P43365 314 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SLCO1A2P46721 670 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 LIM2P55344 173 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SLC26A5P58743 744 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 RPS13P62277 151 aaKnown RBP4.21□□□□□ -1.74
NUP54-206ENST00000508465 ARG2P78540 354 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SLC13A2Q13183 592 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 MFAP5Q13361 173 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 RAB39AQ14964 217 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 ODF1Q14990 250 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 AP5B1Q2VPB7 878 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 TECRLQ5HYJ1 363 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 PAGE2BQ5JRK9 111 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 ACER2Q5QJU3 275 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 DEPDC1Q5TB30 811 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 PLAG1Q6DJT9 500 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 HIST2H2BCQ6DN03 193 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SPINK14Q6IE38 97 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 OR4C11Q6IEV9 310 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 KLC3Q6P597 504 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 SCIMPQ6UWF3 145 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 IGFL2Q6UWQ7 119 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 ZNF793Q6ZN11 406 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 Q6ZS92 163 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 TAOK1Q7L7X3 1001 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 LRRC70Q7Z2Q7 622 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 CRLF3Q8IUI8 442 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 LAS2Q8IYD9 372 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 BEST3Q8N1M1 668 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 ZNF321PQ8N8H1 164 aa4.21□□□□□ -1.74
NUP54-206ENST00000508465 ACOT4Q8N9L9 421 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms