RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 IFNEQ86WN2 208 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 OR4N2Q8NGD1 307 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 FAM76AQ8TAV0 307 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLDND1-216ENST00000507944 FAM222BQ8WU58 562 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 EFHD2Q96C19 240 aaPredicted RBP18.92■□□□□ 0.62
CLDND1-216ENST00000507944 DTNBP1Q96EV8 351 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 MIEF1Q9NQG6 463 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 RASSF1Q9NS23 344 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 TAS2R7Q9NYW3 318 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 WBP11Q9Y2W2 641 aaKnown RBP18.92■□□□□ 0.62
CLDND1-216ENST00000507944 OR10H1Q9Y4A9 318 aa18.92■□□□□ 0.62
CLDND1-216ENST00000507944 POLR3HQ9Y535 204 aaPredicted RBP18.92■□□□□ 0.62
CLDND1-216ENST00000507944 A0A087WV62 115 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 FAM221AA4D161 298 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 H0Y3Z8 333 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 PLIN3O60664 434 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 COQ9O75208 318 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 SHBGP04278 402 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 TMIGD3P0DMS9 266 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-216ENST00000507944 CRHR1P34998 444 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 STARP49675 285 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 DGKQP52824 942 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 IST1P53990 364 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 GFRA1P56159 465 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 MRPS22P82650 360 aaKnown RBP18.91■□□□□ 0.62
CLDND1-216ENST00000507944 KIF18BQ86Y91 864 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 RNF138Q8WVD3 245 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 CLEC4MQ9H2X3 399 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-216ENST00000507944 MYNNQ9NPC7 610 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 RRAGDQ9NQL2 400 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-216ENST00000507944 MRPS18CQ9Y3D5 142 aaKnown RBP18.91■□□□□ 0.62
CLDND1-216ENST00000507944 ITPR3Q14573 2671 aa18.91■□□□□ 0.62
CLDND1-216ENST00000507944 EEF1E1-BLOC1S5C9J1V9 151 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 EEF1E1O43324 174 aaKnown RBP18.9■□□□□ 0.62
CLDND1-216ENST00000507944 RSL1D1O76021 490 aaKnown RBP18.9■□□□□ 0.62
CLDND1-216ENST00000507944 SLITRK5O94991 958 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 GRK2P25098 689 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 MC3RP41968 323 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 GAS1P54826 345 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 PSG6Q00889 435 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 ZNF155Q12901 538 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-216ENST00000507944 SH2D4BQ5SQS7 431 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 AAGABQ6PD74 315 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 ADGRE4PQ86SQ3 457 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 EIF1ADQ8N9N8 165 aaKnown RBP18.9■□□□□ 0.62
CLDND1-216ENST00000507944 CCDC63Q8NA47 563 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 LRRN4CLQ8ND94 238 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 UBLCP1Q8WVY7 318 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-216ENST00000507944 SFXN2Q96NB2 322 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 TM9SF2Q99805 663 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 TNFRSF12AQ9NP84 129 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 OXSMQ9NWU1 459 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 JKAMPQ9P055 326 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 DKKL1Q9UK85 242 aa18.9■□□□□ 0.62
CLDND1-216ENST00000507944 C19orf53Q9UNZ5 99 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-216ENST00000507944 SETD2Q9BYW2 2564 aaPredicted RBP18.89■□□□□ 0.62
CLDND1-216ENST00000507944 TUBAL3A6NHL2 446 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 A6NNC1 897 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 CLCA1A8K7I4 914 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 PLOD2O00469 737 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 ZIC3O60481 467 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 RCBTB2O95199 551 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 UROSP10746 265 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 CPA3P15088 417 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 TACR1P25103 407 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 DPP4P27487 766 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 NTSP30990 170 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 LHX2P50458 406 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 RIPPLY3P57055 190 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 FOXF2Q12947 444 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 DAZAP2Q15038 168 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-216ENST00000507944 CYP27C1Q4G0S4 372 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 NOXRED1Q6NXP6 359 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 TMEM107Q6UX40 140 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 TDRPQ86YL5 185 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 WNT2BQ93097 391 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 ZFP3Q96NJ6 502 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 UCN2Q96RP3 112 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 C12orf65Q9H3J6 166 aaKnown RBP18.89■□□□□ 0.61
CLDND1-216ENST00000507944 GLIPR2Q9H4G4 154 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 PPCSQ9HAB8 311 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 CBLCQ9ULV8 474 aa18.89■□□□□ 0.61
CLDND1-216ENST00000507944 SMIM23A6NLE4 172 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 UPK1AO00322 258 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 COPEO14579 308 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 TCEA1P23193 301 aaKnown RBP18.88■□□□□ 0.61
CLDND1-216ENST00000507944 CHMP24386 653 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 PLXDC2Q6UX71 529 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 IKBIPQ70UQ0 350 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 OR4K17Q8NGC6 315 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 GOT1L1Q8NHS2 421 aaPredicted RBP18.88■□□□□ 0.61
CLDND1-216ENST00000507944 NINJ1Q92982 152 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 INTS12Q96CB8 462 aaKnown RBP18.88■□□□□ 0.61
CLDND1-216ENST00000507944 ELP4Q96EB1 424 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 METTL2AQ96IZ6 378 aaKnown RBP18.88■□□□□ 0.61
CLDND1-216ENST00000507944 AMDHD1Q96NU7 426 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 G6PC3Q9BUM1 346 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 LIME1Q9H400 295 aa18.88■□□□□ 0.61
CLDND1-216ENST00000507944 DDX18Q9NVP1 670 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms