RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TUBA3CQ13748 450 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 NNATQ16517 81 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 NTRK2Q16620 822 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 DUSP5Q16690 384 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 RUNDC3AQ59EK9 446 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 TUBA3EQ6PEY2 450 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 HACD2Q6Y1H2 254 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 RETREG3Q86VR2 466 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 METTL25Q8N6Q8 603 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 TMEM178AQ8NBL3 297 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 OR8J3Q8NGG0 315 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 DIO2Q92813 273 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 TMBIM1Q969X1 311 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 RCN3Q96D15 328 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 COL21A1Q96P44 957 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 HOXD1Q9GZZ0 328 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 CACYBPQ9HB71 228 aaKnown RBP18.52■□□□□ 0.56
USP53-203ENST00000507597 CNIH4Q9P003 139 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 P2RX2Q9UBL9 471 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 LHX6Q9UPM6 363 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 L3MBTL1Q9Y468 752 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 PCDHGB6Q9Y5F9 930 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 EPG5Q9HCE0 2579 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 NADKO95544 446 aaPredicted RBP18.51■□□□□ 0.55
USP53-203ENST00000507597 IL33O95760 270 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 P04436 131 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 OR12D1P0DN82 309 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 PTPN6P29350 595 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 CD96P40200 585 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 NUDT2P50583 147 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 DSTNP60981 165 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 RGNQ15493 299 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 OR1C1Q15619 314 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 TBCELQ5QJ74 424 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 EXOSC6Q5RKV6 272 aaKnown RBP18.51■□□□□ 0.55
USP53-203ENST00000507597 SLC22A10Q63ZE4 541 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 TNFAIP8L2Q6P589 184 aaPredicted RBP18.51■□□□□ 0.55
USP53-203ENST00000507597 NPSR1Q6W5P4 371 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 CLEC4FQ8N1N0 589 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 FAM98AQ8NCA5 519 aaKnown RBP18.51■□□□□ 0.55
USP53-203ENST00000507597 FAM13CQ8NE31 585 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 PMM1Q92871 262 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 DTNBP1Q96EV8 351 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 RMND5BQ96G75 393 aaPredicted RBP18.51■□□□□ 0.55
USP53-203ENST00000507597 SLC35A4Q96G79 324 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 SPATA9Q9BWV2 254 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 ZBTB20Q9HC78 741 aaPredicted RBP18.51■□□□□ 0.55
USP53-203ENST00000507597 POLE3Q9NRF9 147 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 SLAMF8Q9P0V8 285 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 TP53TG5Q9Y2B4 290 aa18.51■□□□□ 0.55
USP53-203ENST00000507597 TRBV5-3A0A0A0MS03 114 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 OR6B1O95007 311 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 UNC5CO95185 931 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 HPGDP15428 266 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 MAN2A2P49641 1150 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.5■□□□□ 0.55
USP53-203ENST00000507597 ZNF791Q3KP31 576 aaPredicted RBP18.5■□□□□ 0.55
USP53-203ENST00000507597 ARHGAP11BQ3KRB8 267 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 GTDC1Q4AE62 458 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 DCST2Q5T1A1 773 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 SLC25A25Q6KCM7 469 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 C16orf47Q6ZP98 133 aaPredicted RBP18.5■□□□□ 0.55
USP53-203ENST00000507597 AMER2Q8N7J2 671 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 BCORP1Q8N888 145 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 TEX19Q8NA77 164 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 CHDHQ8NE62 594 aaPredicted RBP18.5■□□□□ 0.55
USP53-203ENST00000507597 FBXO30Q8TB52 745 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 PNPT1Q8TCS8 783 aaKnown RBP18.5■□□□□ 0.55
USP53-203ENST00000507597 PIK3R3Q92569 461 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 CDS1Q92903 461 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 ECSITQ9BQ95 431 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 SLC25A37Q9NYZ2 338 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 PLA2G3Q9NZ20 509 aa18.5■□□□□ 0.55
USP53-203ENST00000507597 KLF13Q9Y2Y9 288 aaPredicted RBP18.5■□□□□ 0.55
USP53-203ENST00000507597 CCT8L1PA6NM43 557 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 C5orf58C9J3I9 102 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 KLRC4-KLRK1H3BQV0 150 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 STX11O75558 287 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 KCNK2O95069 426 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 GUSBP08236 651 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 NR2F1P10589 423 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 HOXB9P17482 250 aaPredicted RBP18.49■□□□□ 0.55
USP53-203ENST00000507597 GPX2P18283 190 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 ENDOUP21128 410 aaKnown RBP18.49■□□□□ 0.55
USP53-203ENST00000507597 RFX3P48380 749 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 TNFSF10P50591 281 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 RPS26P62854 115 aaKnown RBP18.49■□□□□ 0.55
USP53-203ENST00000507597 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.49■□□□□ 0.55
USP53-203ENST00000507597 NANOGP8Q6NSW7 305 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 C16orf89Q6UX73 402 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 WDR53Q7Z5U6 358 aaPredicted RBP18.49■□□□□ 0.55
USP53-203ENST00000507597 SLC30A8Q8IWU4 369 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 PRR22Q8IZ63 422 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 ZNF527Q8NB42 609 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 OR5D16Q8NGK9 328 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 FAM110BQ8TC76 370 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 OIT3Q8WWZ8 545 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 AURKBQ96GD4 344 aaPredicted RBP18.49■□□□□ 0.55
USP53-203ENST00000507597 ADOQ96SZ5 270 aa18.49■□□□□ 0.55
USP53-203ENST00000507597 NANOGQ9H9S0 305 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms