RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 OR2B2Q9GZK3 357 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 GLIPR2Q9H4G4 154 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 LRTM1Q9HBL6 345 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 MIEF1Q9NQG6 463 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 TAS2R9Q9NYW1 312 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 KLRF1Q9NZS2 232 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 SLC17A7Q9P2U7 560 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 SLC6A5Q9Y345 797 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 DNAJC15Q9Y5T4 150 aa8.27□□□□□ -1.09
PDLIM5-209ENST00000506632 OTOGQ6ZRI0 2925 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ENO4A6NNW6 628 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 TMEM233B4DJY2 109 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 B4DXG7 233 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 LSM1O15116 133 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 RGS14O43566 566 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF500O60304 480 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 CBR3O75828 277 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 TRAPPC6AO75865 159 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 NTSP30990 170 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ARRB2P32121 409 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 TIMP3P35625 211 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 MAP3K8P41279 467 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 MC3RP41968 323 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 FRKP42685 505 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ETV4P43268 484 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 KRTAP10-9P60411 292 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF155Q12901 538 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 PDE7AQ13946 482 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 EFR3AQ14156 821 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 SLC25A35Q3KQZ1 300 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 RFTN2Q52LD8 501 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF385BQ569K4 471 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ARL13AQ5H913 290 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 WIPI1Q5MNZ9 446 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 NSUN5P2Q63ZY6 315 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 POMZP3Q6PJE2 187 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 TMEM107Q6UX40 140 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 LARP4Q71RC2 724 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ADGRE4PQ86SQ3 457 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 LACC1Q8IV20 430 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 SLC44A2Q8IWA5 706 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 PM20D2Q8IYS1 436 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 MREGQ8N565 214 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 NAXEQ8NCW5 288 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 OR4N2Q8NGD1 307 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 TCP10LQ8TDR4 215 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ELP4Q96EB1 424 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 WDYHV1Q96HA8 205 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ADOQ96SZ5 270 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 IQCGQ9H095 443 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 SERHLQ9NQF3 203 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 ALKBH4Q9NXW9 302 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 SENP1Q9P0U3 644 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 MAPRE3Q9UPY8 281 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 TMED5Q9Y3A6 229 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 MRPS18CQ9Y3D5 142 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 WIF1Q9Y5W5 379 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 SPG11Q96JI7 2443 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 KIAA1549Q9HCM3 1950 aa8.26□□□□□ -1.09
PDLIM5-209ENST00000506632 TACC2O95359 2948 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 MBD3L4A6NDZ8 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 MBD3L3A6NE82 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 MBD3L5A6NJ08 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CD8B2A6NJW9 211 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 HSPB2A8KAH6 182 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 PDPK1O15530 556 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 TYROBPO43914 113 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 SPAG7O75391 227 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 SLU7O95391 586 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CHEK2O96017 543 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 ACTL6AO96019 429 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 LINC00032P0C843 101 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CYP4B1P13584 511 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CPN1P15169 458 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CREB1P16220 341 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 IL12BP29460 328 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 SRD5A2P31213 254 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 SERPINB5P36952 375 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 GFRA1P56159 465 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 DLX5P56178 289 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 MRPS22P82650 360 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 IFFO1Q0D2I5 559 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 HSPB2Q16082 182 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CYP27C1Q4G0S4 372 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 XKR7Q5GH72 579 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 ZNF551Q7Z340 670 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 YRDCQ86U90 279 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 PLCZ1Q86YW0 608 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 CLYBLQ8N0X4 340 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 RELL2Q8NC24 303 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 TNIP2Q8NFZ5 429 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 MBD3L2Q8NHZ7 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 ZPLD1Q8TCW7 415 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 TWIST2Q8WVJ9 160 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 ABTB1Q969K4 478 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 EFHD2Q96C19 240 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 LMF2Q9BU23 707 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 G6PC3Q9BUM1 346 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 REEP4Q9H6H4 257 aa8.25□□□□□ -1.09
PDLIM5-209ENST00000506632 MCCC2Q9HCC0 563 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms