RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 HMCESQ96FZ2 354 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PCED1BQ96HM7 432 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF354BQ96LW1 612 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MUS81Q96NY9 551 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SIGLEC11Q96RL6 698 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ACBD6Q9BR61 282 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MFRPQ9BY79 579 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RAB6CQ9H0N0 254 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CCDC59Q9P031 241 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CFAP20Q9Y6A4 193 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ALPK2Q86TB3 2170 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A1W2PPK0 400 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TCRBV16S1A1N1A0A5B0 115 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GTPBP1O00178 669 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CDC7O00311 574 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 EREGO14944 169 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ARPC2O15144 300 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TCAPO15273 167 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC16A6O15403 523 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ARPC5O15511 151 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CDRT1O95170 752 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 HIST1H2ABP04908 130 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SERPINA5P05154 406 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ALPLP05186 524 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FABP3P05413 133 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ALPPL2P10696 532 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 AMD1P17707 334 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NT5EP21589 574 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FSHRP23945 695 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GABRR2P28476 465 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 HOXA9P31269 272 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 PCGF2P35227 344 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 PTGFRP43088 359 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 OR1E2P47887 323 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RGS8P57771 180 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 PITX1P78337 314 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CSTF1Q05048 431 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ILF2Q12905 390 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SF1Q15637 639 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CHRNA6Q15825 494 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM255AQ5JRV8 349 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 C10orf91Q5T1B1 145 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 OR4F3Q6IEY1 312 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RAB12Q6IQ22 244 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ACSM5Q6NUN0 579 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 MTFR2Q6P444 385 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FRRS1Q6ZNA5 592 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 HIST3H2AQ7L7L0 130 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 KIF18BQ86Y91 864 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF280BQ86YH2 543 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NAXEQ8NCW5 288 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 OR2V1Q8NHB1 315 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NEK7Q8TDX7 302 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ADAMTS15Q8TE58 950 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 DNASE1L2Q92874 299 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RPL3LQ92901 407 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TNFRSF14Q92956 283 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 HIST1H2ACQ93077 130 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 YIPF6Q96EC8 236 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM71F1Q96KD3 344 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 Q96MT0 163 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 MCCC1Q96RQ3 725 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TRMT61BQ9BVS5 477 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC39A8Q9C0K1 460 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 EXOSC3Q9NQT5 275 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 DNAJC11Q9NVH1 559 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SOHLH2Q9NX45 425 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 KCND3Q9UK17 655 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 BAIAP2Q9UQB8 552 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FKBP7Q9Y680 259 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NBASA2RRP1 2371 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CXorf65A6NEN9 183 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF99A8MXY4 864 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 B4E171 279 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 E9PAM4 449 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC28A1O00337 649 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NRP1O14786 923 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC30A4O14863 429 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FGF10O15520 208 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SGCEO43556 437 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NME6O75414 186 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RBMXL2O75526 392 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GABARAPO95166 117 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 VNN2O95498 520 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 C1QBP02746 253 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 IFNW1P05000 195 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FGF1P05230 155 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RD3LP0DJH9 198 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 IL7P13232 177 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 LAMP2P13473 410 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 C6P13671 934 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GJA1P17302 382 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 IL11P20809 199 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 LCN1P31025 176 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TGFBR2P37173 567 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SUCLG1P53597 346 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 STXBP1P61764 594 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SNRPD1P62314 119 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 POLR2LP62875 67 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms