RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 S100A5P33763 92 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 SOX6P35712 828 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 SRP54P61011 504 aaKnown RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 SIM1P81133 766 aaPredicted RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 GPR18Q14330 331 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 SNAPC1Q16533 368 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 AGAP7PQ5VUJ5 663 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 FIGLAQ6QHK4 219 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 RASSF6Q6ZTQ3 369 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 USP53Q70EK8 1073 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 ZCCHC10Q8TBK6 192 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 TMEM163Q8TC26 289 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 CDS1Q92903 461 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 POLR2J2Q9GZM3 115 aaKnown RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 ACTR10Q9NZ32 417 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 SLC13A4Q9UKG4 626 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 SLC22A7Q9Y694 548 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 COL4A2P08572 1712 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 GSAPA4D1B5 854 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 RAB36O95755 333 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 AGR2O95994 175 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 POLR2CP19387 275 aaPredicted RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 TPMTP51580 245 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 MRPS21P82921 87 aaKnown RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 TFF2Q03403 129 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 CDC20Q12834 499 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 ARHGAP11BQ3KRB8 267 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 TMEM31Q5JXX7 168 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 STEAP3Q658P3 488 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 TYW3Q6IPR3 259 aaKnown RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 SLC27A4Q6P1M0 643 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 ZNF730Q6ZMV8 503 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 CCDC190Q86UF4 302 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 NKAIN4Q8IVV8 208 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 OR4N5Q8IXE1 308 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 PHC2Q8IXK0 858 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 CADM3Q8N126 398 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 TEX47Q8TBZ9 253 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 COL26A1Q96A83 441 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 MTHFD2LQ9H903 347 aaPredicted RBP12.19□□□□□ -0.46
MATR3-233ENST00000504203 POLE4Q9NR33 117 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 ABCB10Q9NRK6 738 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 KLHL28Q9NXS3 571 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 CNIH4Q9P003 139 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 LRP4O75096 1905 aa12.19□□□□□ -0.46
MATR3-233ENST00000504203 LOC105369274A0A096LPK9 316 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 LOC102723532A0A0G2JNH3 316 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 OR6C74A6NCV1 312 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 URADA6NGE7 173 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 C10orf142B7Z368 130 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 MYL12BO14950 172 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 PRODHO43272 600 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 TBX1O43435 398 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 KLF4O43474 513 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 B3GALT2O43825 422 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 CCNYL3P0C7X3 344 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 DRD1P21728 446 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 PSMA1P25786 263 aaKnown RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 ETV5P41161 510 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 AVPR1BP47901 424 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 ETV1P50549 477 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 HOXC5Q00444 222 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 DUSP5Q16690 384 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 DECR1Q16698 335 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 PUS10Q3MIT2 529 aaKnown RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 FLYWCH1Q4VC44 716 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 C3orf38Q5JPI3 329 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 FHL5Q5TD97 284 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 KIAA1324Q6UXG2 1013 aaKnown RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 OR4N4Q8N0Y3 316 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 FAM46AQ96IP4 442 aaKnown RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 CNPPD1Q9BV87 410 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 ASPNQ9BXN1 380 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 SP140LQ9H930 580 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 FGF20Q9NP95 211 aaPredicted RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 PTGFRNQ9P2B2 879 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 STUB1Q9UNE7 303 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 ZNF443Q9Y2A4 671 aaPredicted RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 NTNG1Q9Y2I2 539 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 HYKKA2RU49 373 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 WWP2O00308 870 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 ACP2P11117 423 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 CPMP14384 443 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 FPR3P25089 353 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 RPS19P39019 145 aaKnown RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 RGS8P57771 180 aaPredicted RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 YPEL5P62699 121 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 MLLT1Q03111 559 aaPredicted RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 RAB40BQ12829 278 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 MAP4K2Q12851 820 aa12.18□□□□□ -0.46
MATR3-233ENST00000504203 C1DQ13901 141 aaKnown RBP12.18□□□□□ -0.46
MATR3-233ENST00000504203 KLHL22Q53GT1 634 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms