RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 TNFAIP8L3Q5GJ75 292 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 C1orf185Q5T7R7 199 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 WDR53Q7Z5U6 358 aaPredicted RBP16.79■□□□□ 0.28
HOXD11-202ENST00000498438 CCDC71Q8IV32 467 aaPredicted RBP16.79■□□□□ 0.28
HOXD11-202ENST00000498438 ASB5Q8WWX0 329 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 TTYH2Q9BSA4 534 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 SERHLQ9NQF3 203 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 SH3BP4Q9P0V3 963 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 SLC6A5Q9Y345 797 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 FAM90A27PA6NNH2 459 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 TMEM114B3SHH9 223 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 TM9SF1O15321 606 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 ITM2AO43736 263 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 HSPA4LO95757 839 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 SERPINE1P05121 402 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 IFI6P09912 130 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 GLI4P10075 376 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 PRF1P14222 555 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 COX6B1P14854 86 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 GABRA1P14867 456 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 GPC1P35052 558 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 PNLIPRP2P54317 469 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 CRYZQ08257 329 aaKnown RBP16.78■□□□□ 0.28
HOXD11-202ENST00000498438 ULK2Q8IYT8 1036 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 FAM83FQ8NEG4 500 aaPredicted RBP16.78■□□□□ 0.28
HOXD11-202ENST00000498438 OR10Q1Q8NGQ4 319 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 ZFP28Q8NHY6 868 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 ZBED6CLQ96FA7 236 aaPredicted RBP16.78■□□□□ 0.28
HOXD11-202ENST00000498438 C1orf50Q9BV19 199 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 WIF1Q9Y5W5 379 aa16.78■□□□□ 0.28
HOXD11-202ENST00000498438 INTS1Q8N201 2190 aaKnown RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 SCAMP2O15127 329 aaKnown RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 BIRC5O15392 142 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 DHRS4L1P0CG22 281 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 CYP4B1P13584 511 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 HPCAL1P37235 193 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 FRKP42685 505 aaPredicted RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 MANFP55145 182 aaKnown RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 MRPS22P82650 360 aaKnown RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 MPP2Q14168 576 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 ZNHIT3Q15649 155 aaPredicted RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 CYP27C1Q4G0S4 372 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 WIPI1Q5MNZ9 446 aaPredicted RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 C6orf136Q5SQH8 315 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 LRIG3Q6UXM1 1119 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 R3HCC1LQ7Z5L2 792 aaKnown RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 CROCCP2Q86T23 111 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 YRDCQ86U90 279 aaKnown RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 MCEMP1Q8IX19 187 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 WDSUB1Q8N9V3 476 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 FNDC5Q8NAU1 212 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 RNF138Q8WVD3 245 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 MTERF3Q96E29 417 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 PGM2Q96G03 612 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 TIMP4Q99727 224 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 LMF2Q9BU23 707 aaKnown RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 ZNF395Q9H8N7 513 aaPredicted RBP16.77■□□□□ 0.28
HOXD11-202ENST00000498438 Q9N2J8 555 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 KCNK9Q9NPC2 374 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 EQTNQ9NQ60 294 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 CBLCQ9ULV8 474 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 PCDHGB3Q9Y5G1 929 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 ACTL7BQ9Y614 415 aa16.77■□□□□ 0.28
HOXD11-202ENST00000498438 NKX2-6A6NCS4 301 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 ZWINTO95229 277 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 HOXD4P09016 255 aaPredicted RBP16.76■□□□□ 0.27
HOXD11-202ENST00000498438 MYZAPP0CAP1 466 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 EFNA1P20827 205 aaPredicted RBP16.76■□□□□ 0.27
HOXD11-202ENST00000498438 KIR3DL1P43629 444 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 ABCE1P61221 599 aaKnown RBP16.76■□□□□ 0.27
HOXD11-202ENST00000498438 GAB1Q13480 694 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 PTGR1Q14914 329 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 DECR1Q16698 335 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 DCST1Q5T197 706 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 VASNQ6EMK4 673 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 SZRD1Q7Z422 152 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 PLCZ1Q86YW0 608 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 ZNF781Q8N8C0 355 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 OR7A2PQ8NGA2 310 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 LILRB4Q8NHJ6 448 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 TUBGCP3Q96CW5 907 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 UGT2B28Q9BY64 529 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 UCK2Q9BZX2 261 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 RUBCNLQ9H714 662 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 ACSS1Q9NUB1 689 aaPredicted RBP16.76■□□□□ 0.27
HOXD11-202ENST00000498438 ATP6V1HQ9UI12 483 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 LRBAP50851 2863 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 APCP25054 2843 aa16.76■□□□□ 0.27
HOXD11-202ENST00000498438 HCFC1P51610 2035 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 A0A0G2JNJ9 132 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 CBR3O75828 277 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 PRPS2P11908 318 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 BMP7P18075 431 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 BGNP21810 368 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 GRK2P25098 689 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 EVI2BP34910 448 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 PTGER4P35408 488 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 ADH7P40394 386 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 RFX3P48380 749 aa16.75■□□□□ 0.27
HOXD11-202ENST00000498438 GAS1P54826 345 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms