RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ARHGAP42A6NI28 874 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SLC7A4O43246 635 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 DCXO43602 365 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 ZBTB14O43829 449 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 UGT1A9O60656 530 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 ZG16O60844 167 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PRKRAO75569 313 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 APOHP02749 345 aaPredicted RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 FYNP06241 537 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SLC35E2BP0CK96 405 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SLC2A3P11169 496 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 HSD17B1P14061 328 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PORP16435 677 aaPredicted RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 GNB3P16520 340 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 STMN1P16949 149 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TYMPP19971 482 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PIK3R1P27986 724 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 ADRA1AP35348 466 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 GRIA1P42261 906 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 LEPRP48357 1165 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 SLC9A3P48764 834 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 RGS7P49802 495 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SULT1E1P49888 294 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 GEMP55040 296 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TPI1P60174 286 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 OSTNP61366 133 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 GNB1P62873 340 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 RPL10AP62906 217 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 BNIP2Q12982 314 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 FLOT2Q14254 428 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SQLEQ14534 574 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PDK3Q15120 406 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TRIP10Q15642 601 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 FAM83EQ2M2I3 478 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 KCTD21Q4G0X4 260 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SAMD4BQ5PRF9 694 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 IL23RQ5VWK5 629 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 CASC4Q6P4E1 433 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 DHRS4L2Q6PKH6 230 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 RNF165Q6ZSG1 346 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PAQR9Q6ZVX9 377 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PID1Q7Z2X4 250 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 EFL1Q7Z2Z2 1120 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 ARPINQ7Z6K5 226 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 CENPLQ8N0S6 344 aaPredicted RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 SIX6OS1Q8N1H7 587 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 UMODL1-AS1Q8N2C9 162 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TDRD5Q8NAT2 981 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 DRAXINQ8NBI3 349 aaPredicted RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 ADAD2Q8NCV1 583 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 RHEBL1Q8TAI7 183 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PNPT1Q8TCS8 783 aaKnown RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 DTX3LQ8TDB6 740 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SLC2A14Q8TDB8 520 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SLC26A7Q8TE54 656 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 CCDC107Q8WV48 283 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.3□□□□□ -1.72
SSR3-209ENST00000498205 TADA1Q96BN2 335 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 OPTNQ96CV9 577 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 L3HYPDHQ96EM0 354 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 GIMAP5Q96F15 307 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SMARCD1Q96GM5 515 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 BIRC8Q96P09 236 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 HOPXQ9BPY8 73 aaPredicted RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 ACBD6Q9BR61 282 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 MLPHQ9BV36 600 aaPredicted RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 APOL6Q9BWW8 343 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 ANKRD60Q9BZ19 345 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 YIPF3Q9GZM5 350 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 C10orf88Q9H8K7 445 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 UGT1A7Q9HAW7 530 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 UGT1A10Q9HAW8 530 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 UGT1A8Q9HAW9 530 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 ACKR4Q9NPB9 350 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SCRT2Q9NQ03 307 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PFDN4Q9NQP4 134 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 PIGVQ9NUD9 493 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 TBC1D13Q9NVG8 400 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 GPATCH2LQ9NWQ4 482 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 KLHL8Q9P2G9 620 aaPredicted RBP4.3□□□□□ -1.72
SSR3-209ENST00000498205 ABCD2Q9UBJ2 740 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 NEU3Q9UQ49 428 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SNX8Q9Y5X2 465 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SHROOM3Q8TF72 1996 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 SCN10AQ9Y5Y9 1956 aa4.3□□□□□ -1.72
SSR3-209ENST00000498205 NUP205Q92621 2012 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 DOCK4Q8N1I0 1966 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CHD5Q8TDI0 1954 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 LOC102723996A0A087X1L8 192 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 IGHV4-61A0A0C4DH41 118 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 FAM92AA1XBS5 289 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 GLOD5A6NK44 160 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 E9PI62 339 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CREG1O75629 220 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 GRAP2O75791 330 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 SNAI1O95863 264 aaPredicted RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 IGHV4-59P01825 116 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 VTNP04004 478 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 PGK2P07205 417 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms