RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 KRT9P35527 623 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ACTR1BP42025 376 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KIR3DL2P43630 455 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CBX5P45973 191 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NME5P56597 212 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 YBX1P67809 324 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ADORA2A-AS1P86434 159 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ICA1Q05084 483 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DPTQ07507 201 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SLC3A1Q07837 685 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 COX10Q12887 443 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KLF9Q13886 244 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 MELKQ14680 651 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF141Q15928 474 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 NRF1Q16656 503 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 UGCGQ16739 394 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CDONQ4KMG0 1287 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 C14orf177Q52M58 125 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 HHATQ5VTY9 493 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PAPD7Q5XG87 772 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF544Q6NX49 715 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 C8orf82Q6P1X6 216 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 DENND1BQ6P3S1 775 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OLIG3Q7RTU3 272 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 IGDCC3Q8IVU1 814 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZDHHC22Q8N966 263 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PPHLN1Q8NEY8 458 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR1B1Q8NGR6 318 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PHOSPHO2Q8TCD6 241 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PHOSPHO1Q8TCT1 267 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SELENOMQ8WWX9 145 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FGF14Q92915 247 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SMIM12Q96EX1 92 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ATXN7L3BQ96GX2 97 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 USP28Q96RU2 1077 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CDRT15Q96T59 188 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TCF25Q9BQ70 676 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ST6GALNAC5Q9BVH7 336 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 PANK2Q9BZ23 570 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CELF4Q9BZC1 486 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 TRIM15Q9C019 465 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LNPKQ9C0E8 428 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 KLC2Q9H0B6 622 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EPN3Q9H201 632 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MMADHCQ9H3L0 296 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 DYRK4Q9NR20 520 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CCM2LQ9NUG4 571 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF701Q9NV72 531 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 RLIMQ9NVW2 624 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 BARHL2Q9NY43 387 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 SMPD3Q9NY59 655 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ZNF624Q9P2J8 865 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 LINC00527Q9UJ94 153 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ROS1P08922 2347 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DYSFO75923 2080 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 A0A1B0GW55 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A18PA6NE21 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A16PA6NEW6 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A9PA6NNJ1 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A22PA8MWA6 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A12PA8MX19 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A5PA8MXJ8 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A23PA8MXZ1 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM220BPB1ANY3 271 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 H0Y8X5 98 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CEP104O60308 925 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 OR10H3O60404 316 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 CRLF1O75462 422 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TAF5LO75529 589 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ITGA10O75578 1167 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DEDDO75618 318 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 RPP40O75818 363 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 PAPLNO95428 1278 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LY86O95711 162 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 AHSGP02765 367 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LIPFP07098 398 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 ITGA2BP08514 1039 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 STSP08842 583 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A15PP0C7V4 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 FAM90A14PP0C7W9 464 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUX4L2P0CJ85 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUX4L3P0CJ86 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUX4L4P0CJ87 422 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUX4L5P0CJ88 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUX4L6P0CJ89 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DUX4L7P0CJ90 424 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LAG3P18627 525 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 DDCP20711 480 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EDN2P20800 178 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 AK4P27144 223 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 APOBEC1P41238 236 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 NDST2P52849 883 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 BLOC1S1P78537 153 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 LRRC74AQ0VAA2 488 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 EFEMP1Q12805 493 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MOBPQ13875 183 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 TRIM71Q2Q1W2 868 aaKnown RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 ASTE1Q2TB18 679 aaPredicted RBP1.32□□□□□ -2.2
XRN1-214ENST00000498077 CRY2Q49AN0 593 aa1.32□□□□□ -2.2
XRN1-214ENST00000498077 MSANTD2Q6P1R3 559 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms