RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 TUBD1Q9UJT1 453 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 CBLCQ9ULV8 474 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 ZZEF1O43149 2961 aa10.97□□□□□ -0.65
CUX1-210ENST00000497815 PTPRQQ9UMZ3 2332 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 TTC36A6NLP5 189 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 TO15178 435 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 PPM1BO75688 479 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 CBX6O95503 412 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 PIGAP37287 484 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 TMED10P49755 219 aaKnown RBP10.96□□□□□ -0.65
CUX1-210ENST00000497815 MVDP53602 400 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 POU6F2P78424 691 aaPredicted RBP10.96□□□□□ -0.65
CUX1-210ENST00000497815 ART3Q13508 389 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 SELPLGQ14242 412 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 DECR1Q16698 335 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 ZNF791Q3KP31 576 aaPredicted RBP10.96□□□□□ -0.65
CUX1-210ENST00000497815 CYP27C1Q4G0S4 372 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 RUNDC3AQ59EK9 446 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 COLEC12Q5KU26 742 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 EXOSC6Q5RKV6 272 aaKnown RBP10.96□□□□□ -0.65
CUX1-210ENST00000497815 FAM91A1Q658Y4 838 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 OLIG3Q7RTU3 272 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 TRPM8Q7Z2W7 1104 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 C16orf62Q7Z3J2 963 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 MDGA2Q7Z553 956 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 OR10G3Q8NGC4 313 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 OR52N2Q8NGI0 321 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 MIPOL1Q8TD10 442 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 HAS2Q92819 552 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 ANKRD27Q96NW4 1050 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 STACQ99469 402 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 CPPED1Q9BRF8 314 aaPredicted RBP10.96□□□□□ -0.65
CUX1-210ENST00000497815 BTBD2Q9BX70 525 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 HES7Q9BYE0 225 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 RNF32Q9H0A6 362 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 IKZF5Q9H5V7 419 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 EFCAB1Q9HAE3 211 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 KLHL1Q9NR64 748 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 DUSP22Q9NRW4 184 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 FBXO34Q9NWN3 711 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 LUZP4Q9P127 313 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 PCDHGB7Q9Y5F8 929 aa10.96□□□□□ -0.65
CUX1-210ENST00000497815 LOC400499M0QZD8 3231 aa10.96□□□□□ -0.66
CUX1-210ENST00000497815 MED13Q9UHV7 2174 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 DUXAA6NLW8 204 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 EVPLLA8MZ36 301 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 G3V3Y1 287 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 FXYD1O00168 92 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 HMGN4O00479 90 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 DPM1O60762 260 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 UGT2B11O75310 529 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 SLC25A12O75746 678 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 NEURL1O76050 574 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 KCNK2O95069 426 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 IGKV1D-16P01601 117 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 NUDT7P0C024 238 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 ESRRAP11474 423 aaPredicted RBP10.95□□□□□ -0.66
CUX1-210ENST00000497815 PPIBP23284 216 aaKnown RBP10.95□□□□□ -0.66
CUX1-210ENST00000497815 TNFSF10P50591 281 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 ANXA11P50995 505 aaKnown RBP10.95□□□□□ -0.66
CUX1-210ENST00000497815 DSTNP60981 165 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 MXRA7P84157 204 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 KRT72Q14CN4 511 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 RGNQ15493 299 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 NTRK2Q16620 822 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 RABL3Q5HYI8 236 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 DCST2Q5T1A1 773 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 ATAD3BQ5T9A4 648 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 IGFL3Q6UXB1 125 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 RTL4Q6ZR62 310 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 ZNF227Q86WZ6 799 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 GPALPP1Q8IXQ4 340 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 C10orf111Q8N326 155 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 DIO2Q92813 273 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 TMEM125Q96AQ2 219 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 C5orf34Q96MH7 638 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 COL21A1Q96P44 957 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 SLC25A18Q9H1K4 315 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 RAD21L1Q9H4I0 556 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 PIF1Q9H611 641 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 EXD2Q9NVH0 621 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 GIN1Q9NXP7 522 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 FLRT3Q9NZU0 649 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 MRTO4Q9UKD2 239 aaKnown RBP10.95□□□□□ -0.66
CUX1-210ENST00000497815 PCDHGB3Q9Y5G1 929 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 USP24Q9UPU5 2620 aa10.95□□□□□ -0.66
CUX1-210ENST00000497815 TNRC6AQ8NDV7 1962 aaKnown RBP10.94□□□□□ -0.66
CUX1-210ENST00000497815 CPAMD8Q8IZJ3 1885 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 OR6C70A6NIJ9 312 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 TP53I11O14683 189 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 ASNA1O43681 348 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 TSPAN2O60636 221 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 ICOSLGO75144 302 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 IL33O95760 270 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 AGR2O95994 175 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 NPPAP01160 153 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 CCL3P10147 92 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 NR2F1P10589 423 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 SFTPCP11686 197 aa10.94□□□□□ -0.66
CUX1-210ENST00000497815 CYP4B1P13584 511 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms