RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 NEDD8-MDP1E9PL57 170 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 E2F3O00716 465 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 B4GAT1O43505 415 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 CLN5O75503 358 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 LYNP07948 512 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 FAM58BPP0C7Q3 252 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 GHRP10912 638 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 ACKR3P25106 362 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 ALDH3B1P43353 468 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 NPBWR1P48145 328 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 IST1P53990 364 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 VCPP55072 806 aaKnown RBP3.82□□□□□ -1.8
MDM2-220ENST00000496959 NUCB1Q02818 461 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 MGAT3Q09327 533 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 SMC1AQ14683 1233 aaKnown RBP3.82□□□□□ -1.8
MDM2-220ENST00000496959 ZNF79Q15937 498 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 ZNF776Q68DI1 518 aaPredicted RBP3.82□□□□□ -1.8
MDM2-220ENST00000496959 Q6ZVH6 145 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 RAPH1Q70E73 1250 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 PHYHIPLQ96FC7 376 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 RBM18Q96H35 190 aaKnown RBP3.82□□□□□ -1.8
MDM2-220ENST00000496959 PPP1R16AQ96I34 528 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 MCCC1Q96RQ3 725 aaPredicted RBP3.82□□□□□ -1.8
MDM2-220ENST00000496959 MINDY3Q9H8M7 445 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 PDFQ9HBH1 243 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 DDX49Q9Y6V7 483 aaKnown RBP3.82□□□□□ -1.8
MDM2-220ENST00000496959 MTCL1Q9Y4B5 1905 aaKnown RBP3.82□□□□□ -1.8
MDM2-220ENST00000496959 ARHGEF37A1IGU5 675 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 CCDC162PA2VCL2 907 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 ZNF487B1APH4 448 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 H0Y9J4 135 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 LRRTM2O43300 516 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 PLOD3O60568 738 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 RHBDL1O75783 438 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 CHRNA1P02708 482 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 GOLGA8HP0CJ92 632 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 TIA1P31483 386 aaKnown RBP eCLIP3.81□□□□□ -1.81e-6■■■■□ 20
MDM2-220ENST00000496959 CHRNA3P32297 505 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 KIF5BP33176 963 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 TCF7P36402 384 aaPredicted RBP3.81□□□□□ -1.8
MDM2-220ENST00000496959 MAGEA9P43362 315 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 ALKBH5Q6P6C2 394 aaKnown RBP3.81□□□□□ -1.8
MDM2-220ENST00000496959 ASCL5Q7RTU5 278 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 SAMD12Q8N8I0 201 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 SMYD1Q8NB12 490 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 COLGALT1Q8NBJ5 622 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 ZNRF1Q8ND25 227 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 SETD6Q8TBK2 473 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 DNAJB3Q8WWF6 145 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 EXOC4Q96A65 974 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 SGF29Q96ES7 293 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 LZTS2Q9BRK4 669 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 TMEM117Q9H0C3 514 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 ZBP1Q9H171 429 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 GLT8D2Q9H1C3 349 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 TMEM161AQ9NX61 479 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 BARX2Q9UMQ3 279 aaPredicted RBP3.81□□□□□ -1.8
MDM2-220ENST00000496959 C2orf16Q68DN1 1984 aa3.81□□□□□ -1.8
MDM2-220ENST00000496959 TPRP12270 2363 aaKnown RBP3.81□□□□□ -1.8
MDM2-220ENST00000496959 XIRP2A4UGR9 3374 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 DOCK8Q8NF50 2099 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ATRXP46100 2492 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 NFASCO94856 1347 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 PATJQ8NI35 1801 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ZSCAN5CA6NGD5 496 aaPredicted RBP3.8□□□□□ -1.8
MDM2-220ENST00000496959 ANKDD1BA6NHY2 528 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ZNF724A8MTY0 619 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 OR9G9P0C7N8 305 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 CALM1P0DP23 149 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 CALM2P0DP24 149 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 CALM3P0DP25 149 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 TMOD1P28289 359 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 CD52P31358 61 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 FHITP49789 147 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 HLCSP50747 726 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 HAND2P61296 217 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ABRAXAS2Q15018 415 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 SPATA19Q7Z5L4 167 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ADGRD2Q7Z7M1 963 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ZNF713Q8N859 430 aaPredicted RBP3.8□□□□□ -1.8
MDM2-220ENST00000496959 GPR148Q8TDV2 347 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ZBED6CLQ96FA7 236 aaPredicted RBP3.8□□□□□ -1.8
MDM2-220ENST00000496959 SPZ1Q9BXG8 430 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 NT5DC2Q9H857 520 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 RGS18Q9NS28 235 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 CHCHD3Q9NX63 227 aaKnown RBP3.8□□□□□ -1.8
MDM2-220ENST00000496959 SPG21Q9NZD8 308 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 ZNF319Q9P2F9 582 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 DUSP12Q9UNI6 340 aa3.8□□□□□ -1.8
MDM2-220ENST00000496959 EP300Q09472 2414 aaPredicted RBP3.8□□□□□ -1.8
MDM2-220ENST00000496959 OTOGLQ3ZCN5 2332 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 REV3LO60673 3130 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 A0A0D9SFI3 127 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 SRRM4A7MD48 611 aaKnown RBP3.79□□□□□ -1.8
MDM2-220ENST00000496959 KINO60870 393 aaKnown RBP3.79□□□□□ -1.8
MDM2-220ENST00000496959 GIG44P09565 113 aaPredicted RBP3.79□□□□□ -1.8
MDM2-220ENST00000496959 DNAJB1P25685 340 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 CRYBB1P53674 252 aaPredicted RBP3.79□□□□□ -1.8
MDM2-220ENST00000496959 SP4Q02446 784 aa3.79□□□□□ -1.8
MDM2-220ENST00000496959 FOLH1Q04609 750 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms