RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 FBXL3Q9UKT7 428 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 NIP7Q9Y221 180 aaKnown RBP eCLIP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC27A6Q9Y2P4 619 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PTGDR2Q9Y5Y4 395 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CCDC141Q6ZP82 1450 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SPATA31A1Q5TZJ5 1347 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF532Q9HCE3 1301 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KDM6AO15550 1401 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 VPS8Q8N3P4 1428 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM135AQ9P2D6 1515 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A087WZ62 844 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TBC1D3KA0A087X1G2 549 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ST20-MTHFSA0A0A6YYL1 179 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1W2PNV4 684 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TCRBV21S2A2A0A5A6 115 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MEIOCA2RUB1 952 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ANKRD61A6NGH8 418 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM189-UBE2V1I3L0A0 370 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ST8SIA3O43173 380 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF264O43296 627 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF208O43345 1280 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OR10H2O60403 315 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT2B11O75310 529 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ENTPD5O75356 428 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ADAP1O75689 374 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DFFBO76075 338 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PRSS23O95084 383 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PSMG1O95456 288 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PTTG1O95997 202 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 IFNA21P01568 189 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 GBAP04062 536 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM58BPP0C7Q3 252 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TRAPPC2P0DI81 140 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TRAPPC2BP0DI82 140 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 NPPBP16860 134 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF23P17027 643 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 GM2AP17900 193 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PAICSP22234 425 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MYF6P23409 242 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MARK3P27448 753 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ACADLP28330 430 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 NDUFS1P28331 727 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 FMO3P31513 532 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DDOSTP39656 456 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CEACAM3P40198 252 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KIR2DL3P43628 341 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MAP2K4P45985 399 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KCNJ3P48549 501 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CXCR3P49682 368 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 STK19P49842 368 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 HLCSP50747 726 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 RAP1BP61224 184 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CSNK2A1P68400 391 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 NKX6-1P78426 367 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SORDQ00796 357 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PTP4A2Q12974 167 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC13A2Q13183 592 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 BIKQ13323 160 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CRHR2Q13324 411 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CTTNQ14247 550 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 P2RY14Q15391 338 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 AMZ1Q400G9 498 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CDNFQ49AH0 187 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CRY2Q49AN0 593 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 AASDHQ4L235 1098 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PABPC1L2AQ5JQF8 200 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DNLZQ5SXM8 178 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SCIMPQ6UWF3 145 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT2A3Q6UWM9 527 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 GCNT7Q6ZNI0 430 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DPY19L3Q6ZPD9 716 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 LINC00299Q6ZSB3 139 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ASB18Q6ZVZ8 466 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ARPINQ7Z6K5 226 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ANGPTL5Q86XS5 388 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SYT12Q8IV01 421 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 RHOT1Q8IXI2 618 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PUSL1Q8N0Z8 303 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PQLC3Q8N755 202 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 RASGEF1AQ8N9B8 481 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CSNK2A3Q8NEV1 391 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DBF4BQ8NFT6 615 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OR13C9Q8NGT0 318 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SPATA22Q8NHS9 363 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DNAJB14Q8TBM8 379 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DYNC2LI1Q8TCX1 351 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 RNASE8Q8TDE3 154 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CXorf40AQ8TE69 158 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ERGIC1Q969X5 290 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OTULINQ96BN8 352 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CCDC124Q96CT7 223 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SENP5Q96HI0 755 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KLHL15Q96M94 604 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MCCC1Q96RQ3 725 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF347Q96SE7 839 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 GDF15Q99988 308 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM109Q9BVC6 243 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PHF7Q9BWX1 381 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ELOVL4Q9GZR5 314 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 HAPLN2Q9GZV7 340 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms